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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G53220
Type: Protein GRN ID: np36386 Name:
Annotation: unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink).
Gene Locus: AT5G53220
Gene Expression (Affy ATH1 probeset): 248251_at    
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G53220  --  is the target gene of  --  ath-miR396b
3 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT5G58980
4 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  BIO1
5 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT5G43060
6 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  ACI1
7 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT4G12050
8 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT3G19400
9 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  FLU
10 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT2G34530
11 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT2G15630
12 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT1G80060
13 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT1G35370
14 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AtGRF2; GRF2
15 AT5G53220  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AtGRF3; GRF3
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