Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G45700
Type: Protein GRN ID: np20131 Name:
Annotation: sterile alpha motif (SAM) domain-containing protein
Gene Locus: AT2G45700
Gene Expression (Affy ATH1 probeset): 267508_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G45700  --  has similar expression pattern (mutual information value=0.857488) with  --  AT2G16940
3 AT2G45700  --  has similar expression pattern (mutual information value=0.88708) with  --  AT1G22660
4 AT2G45700  --  has similar expression pattern (mutual information value=0.827888) with  --  MOS3; NUP96; PRE; SAR3
5 AT2G45700  --  has similar expression pattern (mutual information value=0.801774) with  --  AT1G66660
6 AT2G45700  --  has similar expression pattern (mutual information value=0.808981) with  --  AT4G11790
7 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910
8 AT2G45700  --  has similar expression pattern (mutual information value=0.855822) with  --  CIP111
9 AT2G45700  --  has similar expression pattern (mutual information value=0.857488) with  --  AT2G16940  --  has similar expression pattern (mutual information value=0.834326) with  --  AT2G25970
10 AT2G45700  --  has similar expression pattern (mutual information value=0.857488) with  --  AT2G16940  --  transport  --  Protein-cysteine
11 AT2G45700  --  has similar expression pattern (mutual information value=0.857488) with  --  AT2G16940  --  transport  --  Bile salt
12 AT2G45700  --  has similar expression pattern (mutual information value=0.857488) with  --  AT2G16940  --  transport  --  Polypeptide
13 AT2G45700  --  has similar expression pattern (mutual information value=0.857488) with  --  AT2G16940  --  transport  --  HCO3-
14 AT2G45700  --  has similar expression pattern (mutual information value=0.827888) with  --  MOS3; NUP96; PRE; SAR3  --  interacts with  --  BAL; SNC1
15 AT2G45700  --  has similar expression pattern (mutual information value=0.827888) with  --  MOS3; NUP96; PRE; SAR3  --  has similar expression pattern (mutual information value=0.980351) with  --  AT2G28450
16 AT2G45700  --  has similar expression pattern (mutual information value=0.827888) with  --  MOS3; NUP96; PRE; SAR3  --  has similar expression pattern (mutual information value=0.831364) with  --  DIM1A
17 AT2G45700  --  has similar expression pattern (mutual information value=0.801774) with  --  AT1G66660  --  has similar expression pattern (mutual information value=0.877232) with  --  AT2G03270
18 AT2G45700  --  has similar expression pattern (mutual information value=0.801774) with  --  AT1G66660  --  has similar expression pattern (mutual information value=0.807004) with  --  CHA19; CHR19; ETL1
19 AT2G45700  --  has similar expression pattern (mutual information value=0.801774) with  --  AT1G66660  --  has similar expression pattern (mutual information value=0.815535) with  --  ATATH9; ATH9
20 AT2G45700  --  has similar expression pattern (mutual information value=0.801774) with  --  AT1G66660  --  has similar expression pattern (mutual information value=0.890959) with  --  AT4G21110
21 AT2G45700  --  has similar expression pattern (mutual information value=0.808981) with  --  AT4G11790  --  has similar expression pattern (mutual information value=0.831601) with  --  AT3G57570
22 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.81567) with  --  EMB2776; LIS
23 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.891348) with  --  AT2G25740
24 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.844311) with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33
25 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.835607) with  --  AtQSOX2; QSOX2
26 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.850187) with  --  AT1G08210
27 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.876422) with  --  ATAN11; LWD1
28 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.804437) with  --  TRFL6
29 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.813433) with  --  AT5G01390
30 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.885184) with  --  AT5G14530
31 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.855396) with  --  AT5G16610
32 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.936634) with  --  AtTHO5; THO5
33 AT2G45700  --  has similar expression pattern (mutual information value=1.08844) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.915628) with  --  AT5G27400
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact