Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G16610
Type: Protein GRN ID: np42313 Name:
Annotation: unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus: AT5G16610
Gene Expression (Affy ATH1 probeset): 250104_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G16610  --  has similar expression pattern (mutual information value=0.805879) with  --  ANAC014; NAC014
3 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910
4 AT5G16610  --  has similar expression pattern (mutual information value=0.821247) with  --  TDP1
5 AT5G16610  --  has similar expression pattern (mutual information value=0.805879) with  --  ANAC014; NAC014  --  has similar expression pattern (mutual information value=0.823769) with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33
6 AT5G16610  --  has similar expression pattern (mutual information value=0.805879) with  --  ANAC014; NAC014  --  has similar expression pattern (mutual information value=0.813794) with  --  EZA1; SDG10; SWN
7 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=1.08844) with  --  AT2G45700
8 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.81567) with  --  EMB2776; LIS
9 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.891348) with  --  AT2G25740
10 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.835607) with  --  AtQSOX2; QSOX2
11 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.808455) with  --  MOS3; NUP96; PRE; SAR3
12 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.850187) with  --  AT1G08210
13 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.876422) with  --  ATAN11; LWD1
14 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.804437) with  --  TRFL6
15 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.823753) with  --  AT1G66660
16 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=1.21159) with  --  AT4G21110
17 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.813433) with  --  AT5G01390
18 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.885184) with  --  AT5G14530
19 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.936634) with  --  AtTHO5; THO5
20 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.915628) with  --  AT5G27400
21 AT5G16610  --  has similar expression pattern (mutual information value=0.855396) with  --  AT4G32910  --  has similar expression pattern (mutual information value=0.816977) with  --  CIP111
22 AT5G16610  --  has similar expression pattern (mutual information value=0.821247) with  --  TDP1  --  interacts with  --  AN
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact