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Location:  Home > Details for node AT5G41560
Type: Protein GRN ID: np39729 Name:
Annotation: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G41560
Gene Expression (Affy ATH1 probeset): 249313_at    
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G41560  --  interacts with  --  pyl9
3 AT5G41560  --  interacts with  --  PYL4
4 AT5G41560  --  interacts with  --  DDB1B
5 AT5G41560  --  interacts with  --  DDB1A
6 AT5G41560  --  interacts with  --  pyl8
7 AT5G41560  --  interacts with  --  pyl9  --  interacts with  --  PYL13; RCAR7
8 AT5G41560  --  interacts with  --  pyl9  --  interacts with  --  HAB1
9 AT5G41560  --  interacts with  --  pyl9  --  interacts with  --  HAI3
10 AT5G41560  --  interacts with  --  pyl9  --  interacts with  --  HAI2
11 AT5G41560  --  interacts with  --  pyl9  --  interacts with  --  AHG3/pp2ca
12 AT5G41560  --  interacts with  --  pyl9  --  interacts with  --  ABI1
13 AT5G41560  --  interacts with  --  pyl9  --  interacts with  --  HAI1
14 AT5G41560  --  interacts with  --  pyl9  --  interacts with  --  ABI2
15 AT5G41560  --  interacts with  --  pyl9  --  is a member of  --  PYR1 family44, coding gene
16 AT5G41560  --  interacts with  --  PYL4  --  interacts with  --  AT5G37740
17 AT5G41560  --  interacts with  --  PYL4  --  interacts with  --  anac032; NAC032
18 AT5G41560  --  interacts with  --  PYL4  --  interacts with  --  PLA IVD; PLP8
19 AT5G41560  --  interacts with  --  PYL4  --  interacts with  --  AT3G17980
20 AT5G41560  --  interacts with  --  DDB1B  --  interacts with  --  FVE
21 AT5G41560  --  interacts with  --  DDB1B  --  interacts with  --  SPA4
22 AT5G41560  --  interacts with  --  DDB1B  --  interacts with  --  SPA3
23 AT5G41560  --  interacts with  --  DDB1B  --  interacts with  --  SPA2
24 AT5G41560  --  interacts with  --  DDB1B  --  interacts with  --  COP1
25 AT5G41560  --  interacts with  --  DDB1B  --  interacts with  --  SPA1
26 AT5G41560  --  interacts with  --  DDB1B  --  interacts with  --  ATCUL4; CUL4
27 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT5G12920
28 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  DCAF1
29 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT2G34260
30 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT4G15730
31 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT4G22250
32 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  DWA3
33 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  ATMSI1; MEE70; MSI1
34 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  DWA2
35 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  PRL1
36 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  FY
37 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT3G45620
38 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT4G28450
39 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT1G65030
40 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  TIF3I1; TRIP-1
41 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  VIP3
42 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  RAE1
43 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  MSI3; NFC3
44 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AtTHO6; DWA1; THO6
45 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  ATDET1; DET1; FUS2
46 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  CIN4; COP10; EMB144; FUS9
47 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT2G19540
48 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT4G03020
49 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT3G20620
50 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  AT1G19750
51 AT5G41560  --  interacts with  --  DDB1A  --  interacts with  --  ATCSA-1
52 AT5G41560  --  interacts with  --  DDB1A  --  is a member of  --  CDD complex?
53 AT5G41560  --  interacts with  --  pyl8  --  interacts with  --  ATMYB44
54 AT5G41560  --  interacts with  --  pyl8  --  interacts with  --  ATMYB73; MYB73
55 AT5G41560  --  interacts with  --  pyl8  --  interacts with  --  MYB77
56 AT5G41560  --  interacts with  --  pyl8  --  interacts with  --  AT1G10585
57 AT5G41560  --  interacts with  --  pyl8  --  interacts with  --  AtMYB49; MYB49
58 AT5G41560  --  interacts with  --  pyl8  --  interacts with  --  AT1G19040
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