Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G62940
Type: Protein GRN ID: np29848 Name:
Annotation: Cysteine proteinases superfamily protein
Gene Locus: AT3G62940
Gene Expression (Affy ATH1 probeset): 251149_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930
3 AT3G62940  --  has similar expression pattern (mutual information value=0.852587) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
4 AT3G62940  --  has similar expression pattern (mutual information value=0.82975) with  --  AT3G49990
5 AT3G62940  --  has similar expression pattern (mutual information value=0.80424) with  --  AT5G41970
6 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.942005) with  --  AT2G19740
7 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.964441) with  --  RPL16A
8 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.01727) with  --  AT1G70600
9 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.01727) with  --  RPL27A; RPL27AB
10 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.04301) with  --  AT1G08360
11 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.0365) with  --  AT3G55750
12 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.0365) with  --  AT1G41880
13 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.27507) with  --  AT1G29250
14 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.04973) with  --  AT1G63660
15 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.17573) with  --  AT3G03920
16 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.943401) with  --  AT3G10610
17 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.968116) with  --  AT3G13940
18 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.950623) with  --  AT3G18740
19 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.20558) with  --  AT3G13160
20 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.962386) with  --  AT3G18940
21 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.17895) with  --  AT4G20020
22 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.958907) with  --  AT4G28200
23 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.972998) with  --  RID3
24 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.03972) with  --  RPL24; RPL24B; STV1
25 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.980201) with  --  AT3G55605
26 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.992329) with  --  AT3G58700
27 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.956659) with  --  AT3G61100
28 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.02197) with  --  AT3G60770
29 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.836404) with  --  AT5G02740
30 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.911679) with  --  AT5G05990
31 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.832198) with  --  ATRH25; STRS2
32 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.23469) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
33 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.834813) with  --  ATMSI1; MEE70; MSI1
34 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=0.940715) with  --  AT5G15750
35 AT3G62940  --  has similar expression pattern (mutual information value=0.847392) with  --  AT1G52930  --  has similar expression pattern (mutual information value=1.08669) with  --  AT2G39795
36 AT3G62940  --  has similar expression pattern (mutual information value=0.852587) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1  --  interacts with  --  ATLOX2
37 AT3G62940  --  has similar expression pattern (mutual information value=0.852587) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1  --  interacts with  --  AT4G01580
38 AT3G62940  --  has similar expression pattern (mutual information value=0.852587) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1  --  has similar expression pattern (mutual information value=0.917892) with  --  AT2G45710
39 AT3G62940  --  has similar expression pattern (mutual information value=0.852587) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1  --  has similar expression pattern (mutual information value=0.880674) with  --  AT1G80750
40 AT3G62940  --  has similar expression pattern (mutual information value=0.852587) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1  --  has similar expression pattern (mutual information value=0.991342) with  --  AT3G12370
41 AT3G62940  --  has similar expression pattern (mutual information value=0.852587) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1  --  has similar expression pattern (mutual information value=0.856155) with  --  RRP41
42 AT3G62940  --  has similar expression pattern (mutual information value=0.852587) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1  --  has similar expression pattern (mutual information value=0.82366) with  --  ATEBP1; ATG2; EBP1
43 AT3G62940  --  has similar expression pattern (mutual information value=0.80424) with  --  AT5G41970  --  has similar expression pattern (mutual information value=0.810054) with  --  ATDEF1; PDF1A
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact