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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G27990
Type: Protein GRN ID: np12734 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Gene Locus: AT1G27990
Gene Expression (Affy ATH1 probeset): 259578_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G27990  --  has similar expression pattern (mutual information value=0.903335) with  --  BGLU4
3 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260
4 AT1G27990  --  has similar expression pattern (mutual information value=0.876083) with  --  AT4G02690
5 AT1G27990  --  has similar expression pattern (mutual information value=0.876848) with  --  AT5G24130
6 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800
7 AT1G27990  --  has similar expression pattern (mutual information value=0.903335) with  --  BGLU4  --  has similar expression pattern (mutual information value=0.969835) with  --  CAT5
8 AT1G27990  --  has similar expression pattern (mutual information value=0.903335) with  --  BGLU4  --  has similar expression pattern (mutual information value=0.844951) with  --  AT3G22350
9 AT1G27990  --  has similar expression pattern (mutual information value=0.903335) with  --  BGLU4  --  has similar expression pattern (mutual information value=1.17878) with  --  AT3G44070
10 AT1G27990  --  has similar expression pattern (mutual information value=0.903335) with  --  BGLU4  --  has similar expression pattern (mutual information value=0.901739) with  --  AT5G59170
11 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.805339) with  --  HB-3; STIP; WOX9; WOX9A
12 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.868836) with  --  AT2G15870
13 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.843109) with  --  PRA1.G1
14 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.841382) with  --  AT1G31100
15 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.905438) with  --  AT1G36150
16 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.85896) with  --  AT1G35617
17 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.855948) with  --  AT1G34440
18 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.819352) with  --  AT3G22340
19 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.832732) with  --  AT2G35080
20 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.830669) with  --  AT3G30280
21 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.889188) with  --  AT5G28590
22 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.851996) with  --  AT4G03950
23 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.904945) with  --  AT3G46360
24 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.934599) with  --  AT3G49480
25 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.905001) with  --  AT3G59845
26 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.856925) with  --  AtPP2-B12; PP2-B12
27 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.898504) with  --  AT5G39640
28 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.87088) with  --  AT5G43800
29 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.886156) with  --  AT5G54220
30 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.859525) with  --  AT5G26640
31 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.83078) with  --  ATINT2; INT2
32 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  has similar expression pattern (mutual information value=0.918928) with  --  AT4G17580
33 AT1G27990  --  has similar expression pattern (mutual information value=0.851952) with  --  AT3G25260  --  transport  --  Cl-
34 AT1G27990  --  has similar expression pattern (mutual information value=0.876083) with  --  AT4G02690  --  transport  --  Nickel(2+)
35 AT1G27990  --  has similar expression pattern (mutual information value=0.876083) with  --  AT4G02690  --  transport  --  Fe3+
36 AT1G27990  --  has similar expression pattern (mutual information value=0.876083) with  --  AT4G02690  --  transport  --  Silver
37 AT1G27990  --  has similar expression pattern (mutual information value=0.876083) with  --  AT4G02690  --  transport  --  Lead
38 AT1G27990  --  has similar expression pattern (mutual information value=0.876083) with  --  AT4G02690  --  transport  --  Mercury(2+)
39 AT1G27990  --  has similar expression pattern (mutual information value=0.876083) with  --  AT4G02690  --  transport  --  Cu2+
40 AT1G27990  --  has similar expression pattern (mutual information value=0.876083) with  --  AT4G02690  --  transport  --  Zinc cation
41 AT1G27990  --  has similar expression pattern (mutual information value=0.876848) with  --  AT5G24130  --  interacts with  --  AT4G26450
42 AT1G27990  --  has similar expression pattern (mutual information value=0.876848) with  --  AT5G24130  --  interacts with  --  AT3G29270
43 AT1G27990  --  has similar expression pattern (mutual information value=0.876848) with  --  AT5G24130  --  has similar expression pattern (mutual information value=1.06274) with  --  AT1G47980
44 AT1G27990  --  has similar expression pattern (mutual information value=0.876848) with  --  AT5G24130  --  has similar expression pattern (mutual information value=0.980429) with  --  AT3G03620
45 AT1G27990  --  has similar expression pattern (mutual information value=0.876848) with  --  AT5G24130  --  has similar expression pattern (mutual information value=0.810042) with  --  AT5G15360
46 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.809091) with  --  AT2G29780
47 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.851882) with  --  anac025; NAC025
48 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.805804) with  --  AT1G09380
49 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.88341) with  --  PAB3
50 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.894367) with  --  AT2G36920
51 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.804579) with  --  AT1G14490
52 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.863767) with  --  AT3G25160
53 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.827608) with  --  ACHT3
54 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.827746) with  --  AT4G12150
55 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.827746) with  --  AT4G12140
56 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.864694) with  --  AT4G18920
57 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.975879) with  --  AT4G19240
58 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.810318) with  --  AT4G29650
59 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.805583) with  --  AT5G45690
60 AT1G27990  --  has similar expression pattern (mutual information value=0.957849) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.875457) with  --  ATNHX3; NHX3
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