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Location:  Home > Details for node AT1G47980
Type: Protein GRN ID: np10636 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT1G47980
Gene Expression (Affy ATH1 probeset): 259615_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130
3 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800
4 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130  --  interacts with  --  AT4G26450
5 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130  --  interacts with  --  AT3G29270
6 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130  --  has similar expression pattern (mutual information value=0.895912) with  --  BGLU4
7 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130  --  has similar expression pattern (mutual information value=0.876848) with  --  AT1G27990
8 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130  --  has similar expression pattern (mutual information value=0.980429) with  --  AT3G03620
9 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130  --  has similar expression pattern (mutual information value=1.05724) with  --  AT3G25260
10 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130  --  has similar expression pattern (mutual information value=0.868397) with  --  AT4G02690
11 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130  --  has similar expression pattern (mutual information value=0.960659) with  --  AT3G44070
12 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130  --  has similar expression pattern (mutual information value=0.810042) with  --  AT5G15360
13 AT1G47980  --  has similar expression pattern (mutual information value=1.06274) with  --  AT5G24130  --  has similar expression pattern (mutual information value=0.805079) with  --  AtPP2-B12; PP2-B12
14 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.809091) with  --  AT2G29780
15 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.851882) with  --  anac025; NAC025
16 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.805804) with  --  AT1G09380
17 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.88341) with  --  PAB3
18 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.894367) with  --  AT2G36920
19 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.870183) with  --  AT1G31100
20 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.804579) with  --  AT1G14490
21 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.863767) with  --  AT3G25160
22 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.850903) with  --  AT3G22350
23 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.827608) with  --  ACHT3
24 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.827746) with  --  AT4G12150
25 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.827746) with  --  AT4G12140
26 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.864694) with  --  AT4G18920
27 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.975879) with  --  AT4G19240
28 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.810318) with  --  AT4G29650
29 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.805583) with  --  AT5G45690
30 AT1G47980  --  has similar expression pattern (mutual information value=0.846096) with  --  AT5G62800  --  has similar expression pattern (mutual information value=0.875457) with  --  ATNHX3; NHX3
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