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Location:  Home > Details for node AT1G20880
Type: Protein GRN ID: np12231 Name:
Annotation: RNA-binding (RRM/RBD/RNP motifs) family protein
Gene Locus: AT1G20880
Gene Expression (Affy ATH1 probeset): 262804_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1
3 AT1G20880  --  interacts with  --  AT1G31750
4 AT1G20880  --  interacts with  --  AT3G22440
5 AT1G20880  --  has similar expression pattern (mutual information value=0.809495) with  --  AT3G10250
6 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  AtTCP11; TCP11
7 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  pil5
8 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  PIF6; PIL2
9 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  PIL1
10 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  PIF3
11 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  ADO3; FKF1
12 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  ADO2; LKP2
13 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  ADO1; FKL2; LKP1; ZTL
14 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  APRR9; PRR9; TL1
15 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  PIF5; PIL6
16 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  PIF4
17 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  NRPB9A; NRPD9A; NRPE9A
18 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  AT5G05190
19 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  AtPPR2; EMB2750; PPR2
20 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  AT2G33410
21 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  AT3G06790
22 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  AT1G67170
23 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  AT5G25490
24 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  AT1G33470
25 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  ATRBP45B; RBP45B
26 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  APRR5; PRR5
27 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  ABI3
28 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  interacts with  --  APRR3; PRR3
29 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  is regulated by  --  RVE1
30 AT1G20880  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1  --  is regulated by  --  LHY; LHY1
31 AT1G20880  --  interacts with  --  AT1G31750  --  interacts with  --  ARR14
32 AT1G20880  --  interacts with  --  AT1G31750  --  interacts with  --  U1A
33 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  PCB2
34 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  ATSPX4; SPX4
35 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  AT4G32190
36 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  AT5G48385
37 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  ATIMPALPHA3; IMPA-3; MOS6
38 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  AT4G14900
39 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  INO
40 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  AT1G01440
41 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  AT1G07840
42 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  AT3G21215
43 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  QWRF1; SCO3
44 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  AT1G06450
45 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  ATPRMT4B; PRMT4B
46 AT1G20880  --  interacts with  --  AT3G22440  --  interacts with  --  HLH1; PAR1
47 AT1G20880  --  interacts with  --  AT3G22440  --  has similar expression pattern (mutual information value=0.861791) with  --  ARR1
48 AT1G20880  --  has similar expression pattern (mutual information value=0.809495) with  --  AT3G10250  --  has similar expression pattern (mutual information value=0.819124) with  --  AT1G02305
49 AT1G20880  --  has similar expression pattern (mutual information value=0.809495) with  --  AT3G10250  --  has similar expression pattern (mutual information value=0.858923) with  --  AT5G19860
50 AT1G20880  --  has similar expression pattern (mutual information value=0.809495) with  --  AT3G10250  --  interacts with  --  AT4G37130
51 AT1G20880  --  has similar expression pattern (mutual information value=0.809495) with  --  AT3G10250  --  is the target gene of  --  ath-miR832-5p
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