KMC2D: GPU Empowered Pipeline for Kinship Matrix Calculation-2D Epistatic Effect
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Analysis
Step 1
Upload the 1st Genotype Matrix Data File (a mxn matrix, e.g additive Z_Matrix.txt)
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- upload data size limit: 2G
Step 2
Upload the 2nd Genotype Matrix Data File (a mxn matrix, e.g domiance W_Matrix.txt)
[Download demo]
- upload data size limit: 2G
Step 3
Parameter Configuration
Marker_Pair_Block([1,000 ~ 1000,000], default as 10,000)
Reminder to the Users:
1. Please carefully check your data file formats before submit: marker matrix files must be comma or Tab delimited text file, and stored as m(rows, Markers)xn(cols, Individuals), each row corresponds to one marker.
2. Welcome to contact us(wezhang AT noble.org) for your speicifc data analysis.