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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G43620
Type: Protein GRN ID: np41910 Name:
Annotation: Pre-mRNA cleavage complex II
Gene Locus: AT5G43620
Transcription factor /
transcriptional regulator:		 transcription factor family C2H2
Gene Expression (Affy ATH1 probeset): 256356_s_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G43620  --  interacts with  --  PCFS4
3 AT5G43620  --  interacts with  --  ATCSTF77; CSTF77
4 AT5G43620  --  interacts with  --  AT1G66500
5 AT5G43620  --  interacts with  --  CLPS3
6 AT5G43620  --  interacts with  --  PCFS4  --  interacts with  --  NRPB8B; NRPD8B; NRPE8B
7 AT5G43620  --  interacts with  --  PCFS4  --  interacts with  --  ATCPSF30; CPSF30
8 AT5G43620  --  interacts with  --  PCFS4  --  is the target gene of  --  ath-miR824
9 AT5G43620  --  interacts with  --  ATCSTF77; CSTF77  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5
10 AT5G43620  --  interacts with  --  ATCSTF77; CSTF77  --  interacts with  --  CSTF64
11 AT5G43620  --  interacts with  --  ATCSTF77; CSTF77  --  interacts with  --  FIP1
12 AT5G43620  --  interacts with  --  ATCSTF77; CSTF77  --  is the target gene of  --  ath-miR858b
13 AT5G43620  --  interacts with  --  ATCSTF77; CSTF77  --  is the target gene of  --  ath-miR858a
14 AT5G43620  --  interacts with  --  AT1G66500  --  interacts with  --  AT3G66652
15 AT5G43620  --  interacts with  --  CLPS3  --  has product (in catalytic reaction)  --  5'-Phospho-DNA
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