Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node RPT4A
Type: Protein GRN ID: np40271 Name: RPT4A
Annotation: RPT4A | regulatory particle triple-A ATPase 4A
Gene Locus: AT5G43010
Gene Expression (Affy ATH1 probeset): 249180_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000
3 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.83508) with  --  AT2G27730
4 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=1.00968) with  --  AT2G18520
5 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.973767) with  --  AT1G60770
6 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=1.27373) with  --  AT1G09590
7 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=1.27373) with  --  AT1G09690
8 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.931655) with  --  AT2G13690
9 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.998322) with  --  AT2G31725
10 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.824736) with  --  AHP2
11 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=1.11147) with  --  AT3G10090
12 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.883809) with  --  AT3G13845
13 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.973459) with  --  AT3G08520
14 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.973459) with  --  AT2G40205
15 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.973459) with  --  AT3G56020
16 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.973459) with  --  AT3G11120
17 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.812354) with  --  IDN2; RDM12
18 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.812354) with  --  AT4G01780
19 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=1.07044) with  --  rps15ae
20 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=1.15741) with  --  AT3G59650
21 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.978531) with  --  AT5G05210
22 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=1.11678) with  --  NACA3
23 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.993837) with  --  ATCBP20
24 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.991409) with  --  SAD1
25 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=1.0424) with  --  AT5G57120
26 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.894665) with  --  AT5G15610
27 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.914168) with  --  AT5G16950
28 RPT4A  --  has similar expression pattern (mutual information value=0.858433) with  --  AT4G22000  --  has similar expression pattern (mutual information value=0.9835) with  --  AT2G41650
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab