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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G56850
Type: Protein GRN ID: np39494 Name:
Annotation: unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Gene Locus: AT5G56850
Gene Expression (Affy ATH1 probeset): 247977_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
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 Small RNA-target regulation
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 Catalytic chemical reaction
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750
3 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.00157) with  --  AOR
4 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.98937) with  --  AT1G04350
5 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.909423) with  --  ATSCO1; ATSCO1/CPEF-G; SCO1
6 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.08834) with  --  FTSH1
7 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.802571) with  --  AAE14
8 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.09937) with  --  NDF1; NDH48
9 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.841396) with  --  AT1G32520
10 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.01601) with  --  AT1G35340
11 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.0274) with  --  AT1G07010
12 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.910412) with  --  AT2G33250
13 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.03684) with  --  AT4G33500
14 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.02115) with  --  OHP; PDE335
15 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.956415) with  --  AT5G42310
16 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.904698) with  --  ATFRO6; FRO6; FRO6
17 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.904698) with  --  ATFRO7; FRO7
18 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.2098) with  --  PDE226; PDS; PDS3
19 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has product (in catalytic reaction)  --  L-3,4-Dihydroxybutan-2-one 4-phosphate
20 AT5G56850  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G59750  --  has product (in catalytic reaction)  --  Formate
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