Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G32520
Type: Protein GRN ID: np16429 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 143 Blast hits to 142 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Gene Locus: AT1G32520
Gene Expression (Affy ATH1 probeset): 260696_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350
3 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750
4 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.985797) with  --  ABCD2
5 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.934378) with  --  FTSH1
6 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=1.02589) with  --  APG2; PGA2; TATC; UNE3
7 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.949228) with  --  AT1G76730
8 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.958003) with  --  AT1G29700
9 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.988558) with  --  AT1G35340
10 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.915727) with  --  AT3G01660
11 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.928313) with  --  AT3G19800
12 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=1.0172) with  --  PGR5-LIKE A
13 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.983927) with  --  CRR31
14 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.945346) with  --  AT4G26860
15 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=1.0538) with  --  AT5G48790
16 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=1.04188) with  --  ATFRO6; FRO6; FRO6
17 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=1.04188) with  --  ATFRO7; FRO7
18 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.851349) with  --  CRL
19 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=1.12273) with  --  HCF164
20 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=1.0142) with  --  LHCA5
21 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=1.07891) with  --  AAE15
22 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.971304) with  --  PDE226; PDS; PDS3
23 AT1G32520  --  has similar expression pattern (mutual information value=0.920213) with  --  AT1G04350  --  has similar expression pattern (mutual information value=0.953764) with  --  CSK
24 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.00157) with  --  AOR
25 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.909423) with  --  ATSCO1; ATSCO1/CPEF-G; SCO1
26 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.802571) with  --  AAE14
27 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.09937) with  --  NDF1; NDH48
28 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.0274) with  --  AT1G07010
29 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.910412) with  --  AT2G33250
30 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.03684) with  --  AT4G33500
31 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has similar expression pattern (mutual information value=1.02115) with  --  OHP; PDE335
32 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.956415) with  --  AT5G42310
33 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has similar expression pattern (mutual information value=0.81469) with  --  AT5G56850
34 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has product (in catalytic reaction)  --  L-3,4-Dihydroxybutan-2-one 4-phosphate
35 AT1G32520  --  has similar expression pattern (mutual information value=0.841396) with  --  AT5G59750  --  has product (in catalytic reaction)  --  Formate
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact