Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G56090
Type: Protein GRN ID: np11971 Name:
Annotation: Tetratricopeptide repeat (TPR)-like superfamily protein [TCDB:5.B.1.1] [TCDB:9.A.14.1]
Gene Locus: AT1G56090
Gene Expression (Affy ATH1 probeset): 262095_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36
3 AT1G56090  --  interacts with  --  ATBPM3; BPM3
4 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  interacts with  --  PTF1; TCP13; TFPD
5 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  interacts with  --  AT3G54390
6 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  interacts with  --  ATWRKY60; WRKY60
7 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  interacts with  --  ATGRX2; CXIP2
8 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  interacts with  --  AT3G15160
9 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  interacts with  --  AT4G01920
10 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  interacts with  --  AT5G40660
11 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  interacts with  --  BRX
12 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  interacts with  --  AT1G64180
13 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  has similar expression pattern (mutual information value=0.812304) with  --  AT2G44370
14 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  has similar expression pattern (mutual information value=0.833868) with  --  HRS1
15 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  has similar expression pattern (mutual information value=0.800077) with  --  AT3G07000
16 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  has similar expression pattern (mutual information value=0.951275) with  --  AT5G43060
17 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  has similar expression pattern (mutual information value=0.84206) with  --  AT5G48560
18 AT1G56090  --  interacts with  --  ATWRKY36; WRKY36  --  has similar expression pattern (mutual information value=1.00592) with  --  AT5G53320
19 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ATMYB69; MYB69
20 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AtMYB56; MYB56
21 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ATBPM5; BPM5
22 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ATBPM1; BPM1
23 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ATHB-16; ATHB16; HB16
24 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ATHB6
25 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ATHB-5; ATHB5; HB5
26 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  HAT3
27 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT3G23700
28 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT4G17486
29 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT4G22720
30 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT4G14740
31 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT4G27870
32 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  HAT2
33 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ATU2AF65A
34 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ATFIP37; FIP37
35 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT5G06270
36 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT5G14440
37 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT4G14900
38 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  RAP2.4; WIND1
39 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  RAP2.4
40 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ASML1; ATWRI1; WRI; WRI1
41 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT2G21380
42 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT1G76230
43 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT1G30860
44 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT1G79910
45 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  AT1G52540
46 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ATCUL3B; CUL3B
47 AT1G56090  --  interacts with  --  ATBPM3; BPM3  --  interacts with  --  ATCUL3; ATCUL3A; CUL3; CUL3A
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab