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Location:  Home > Details for node ATLIG4; LIG4
Type: Protein GRN ID: np38506 Name: ATLIG4; LIG4
Annotation: ATLIG4, LIG4 | DNA ligase IV [EC:6.5.1.1]
Gene Locus: AT5G57160
Gene Expression (Affy ATH1 probeset): 247939_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA
3 ATLIG4; LIG4  --  interacts with  --  XRCC4
4 ATLIG4; LIG4  --  interacts with  --  AtPol{lambda}; Pol{lambda}
5 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.835524) with  --  AT3G59470
6 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.946779) with  --  AT5G44180
7 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  AT1G49250
8 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  ATLIG1; LIG1
9 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  ATTERT; TERT
10 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  Deoxynucleoside triphosphate
11 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  ICU2
12 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  AT5G64420
13 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  AT5G63960
14 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  POLH
15 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  ATDPB2; CYL2; DPB2
16 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  TEB
17 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  POLGAMMA1; PolIB
18 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  NF-YB11
19 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  POL2B; TIL2
20 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  POLGAMMA2; PolIA
21 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  AT1G49980
22 ATLIG4; LIG4  --  has product (in catalytic reaction)  --  DNA  --  is product (in catalytic reaction) of  --  ABO4; EMB142; EMB2284; EMB529; ESD7; POL2A; TIL1
23 ATLIG4; LIG4  --  interacts with  --  XRCC4  --  interacts with  --  ATSNF4; SNF4
24 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.835524) with  --  AT3G59470  --  has similar expression pattern (mutual information value=0.834727) with  --  AT2G46200
25 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.835524) with  --  AT3G59470  --  has similar expression pattern (mutual information value=1.00108) with  --  AT1G60900
26 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.835524) with  --  AT3G59470  --  has similar expression pattern (mutual information value=1.00108) with  --  AT1G60830
27 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.835524) with  --  AT3G59470  --  has similar expression pattern (mutual information value=0.815841) with  --  AT5G10950
28 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.835524) with  --  AT3G59470  --  has similar expression pattern (mutual information value=1.07389) with  --  ATGSTT2; GST10B; GSTT2
29 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.835524) with  --  AT3G59470  --  has similar expression pattern (mutual information value=1.07389) with  --  ATGSTT3; GST10C; GSTT3
30 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.835524) with  --  AT3G59470  --  has similar expression pattern (mutual information value=0.935219) with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
31 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.835524) with  --  AT3G59470  --  interacts with  --  INO
32 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.946779) with  --  AT5G44180  --  interacts with  --  CHR11
33 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.946779) with  --  AT5G44180  --  has similar expression pattern (mutual information value=0.82536) with  --  CHR5
34 ATLIG4; LIG4  --  has similar expression pattern (mutual information value=0.946779) with  --  AT5G44180  --  has similar expression pattern (mutual information value=0.883222) with  --  ATPC2
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