Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node XRCC4

Type: Protein	GRN ID: np28044	Name: XRCC4
Annotation:	XRCC4 \| homolog of human DNA ligase iv-binding protein XRCC4
Gene Locus:	AT3G23100
Gene Expression (Affy ATH1 probeset):	257762_at

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

Ignore nodes having > relationships

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	XRCC4 -- interacts with -- AtPol{lambda}; Pol{lambda}
3	XRCC4 -- interacts with -- ATLIG4; LIG4
4	XRCC4 -- interacts with -- ATSNF4; SNF4
5	XRCC4 -- interacts with -- AtPol{lambda}; Pol{lambda} -- has product (in catalytic reaction) -- DNA
6	XRCC4 -- interacts with -- ATLIG4; LIG4 -- has similar expression pattern (mutual information value=0.835524) with -- AT3G59470
7	XRCC4 -- interacts with -- ATLIG4; LIG4 -- has similar expression pattern (mutual information value=0.946779) with -- AT5G44180
8	XRCC4 -- interacts with -- ATSNF4; SNF4 -- interacts with -- ATHSPRO2; HSPRO2
9	XRCC4 -- interacts with -- ATSNF4; SNF4 -- interacts with -- AT3G55840
10	XRCC4 -- interacts with -- ATSNF4; SNF4 -- interacts with -- AKINBETA1
11	XRCC4 -- interacts with -- ATSNF4; SNF4 -- interacts with -- AKIN11; ATKIN11; KIN11; SNRK1.2
12	XRCC4 -- interacts with -- ATSNF4; SNF4 -- interacts with -- AT4G16360

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