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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G07900
Type: Protein GRN ID: np36311 Name:
Annotation: Mitochondrial transcription termination factor family protein
Gene Locus: AT5G07900
Gene Expression (Affy ATH1 probeset): 250554_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923
3 AT5G07900  --  has similar expression pattern (mutual information value=0.814232) with  --  ASE2; ATASE2; ATPURF2; CIA1
4 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  interacts with  --  AT1G16170
5 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  interacts with  --  AT5G03345
6 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  interacts with  --  AT1G26650
7 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  interacts with  --  AT5G63030
8 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  interacts with  --  AT2G28315
9 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  interacts with  --  AT4G05370
10 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  has similar expression pattern (mutual information value=1.0074) with  --  AtTic20-II; Tic20-II
11 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  has similar expression pattern (mutual information value=1.27075) with  --  AT1G10522
12 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  has similar expression pattern (mutual information value=1.10721) with  --  AT1G11430
13 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  has similar expression pattern (mutual information value=0.907583) with  --  PTAC/ATUHY1/ATWHY1
14 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  has similar expression pattern (mutual information value=0.826699) with  --  AtTic22-IV; Tic22-IV
15 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  has similar expression pattern (mutual information value=0.954434) with  --  AT3G59980
16 AT5G07900  --  has similar expression pattern (mutual information value=0.910833) with  --  EMB1923  --  has similar expression pattern (mutual information value=0.984994) with  --  SVR7
17 AT5G07900  --  has similar expression pattern (mutual information value=0.814232) with  --  ASE2; ATASE2; ATPURF2; CIA1  --  interacts with  --  PTF1; TCP13; TFPD
18 AT5G07900  --  has similar expression pattern (mutual information value=0.814232) with  --  ASE2; ATASE2; ATPURF2; CIA1  --  interacts with  --  AT3G09250
19 AT5G07900  --  has similar expression pattern (mutual information value=0.814232) with  --  ASE2; ATASE2; ATPURF2; CIA1  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate
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