Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G26650
Type: Protein GRN ID: np12547 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT1G26650
Gene Expression (Affy ATH1 probeset): 261273_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G26650  --  interacts with  --  EMB1923
3 AT1G26650  --  interacts with  --  AT3G13680
4 AT1G26650  --  interacts with  --  EMB1923  --  interacts with  --  AT1G16170
5 AT1G26650  --  interacts with  --  EMB1923  --  interacts with  --  AT5G03345
6 AT1G26650  --  interacts with  --  EMB1923  --  interacts with  --  AT5G63030
7 AT1G26650  --  interacts with  --  EMB1923  --  interacts with  --  AT2G28315
8 AT1G26650  --  interacts with  --  EMB1923  --  interacts with  --  AT4G05370
9 AT1G26650  --  interacts with  --  EMB1923  --  has similar expression pattern (mutual information value=1.0074) with  --  AtTic20-II; Tic20-II
10 AT1G26650  --  interacts with  --  EMB1923  --  has similar expression pattern (mutual information value=1.27075) with  --  AT1G10522
11 AT1G26650  --  interacts with  --  EMB1923  --  has similar expression pattern (mutual information value=1.10721) with  --  AT1G11430
12 AT1G26650  --  interacts with  --  EMB1923  --  has similar expression pattern (mutual information value=0.907583) with  --  PTAC/ATUHY1/ATWHY1
13 AT1G26650  --  interacts with  --  EMB1923  --  has similar expression pattern (mutual information value=0.826699) with  --  AtTic22-IV; Tic22-IV
14 AT1G26650  --  interacts with  --  EMB1923  --  has similar expression pattern (mutual information value=0.954434) with  --  AT3G59980
15 AT1G26650  --  interacts with  --  EMB1923  --  has similar expression pattern (mutual information value=0.910833) with  --  AT5G07900
16 AT1G26650  --  interacts with  --  EMB1923  --  has similar expression pattern (mutual information value=0.984994) with  --  SVR7
17 AT1G26650  --  interacts with  --  AT3G13680  --  interacts with  --  AT1G52550
18 AT1G26650  --  interacts with  --  AT3G13680  --  is the target gene of  --  ath-miR4243
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact