Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AFC2; AME1; FC2
Type: Protein GRN ID: np35109 Name: AFC2; AME1; FC2
Annotation: AFC2, AME1, FC2 | FUS3-complementing gene 2 [EC:2.7.12.1]
Gene Locus: AT4G24740
Gene Expression (Affy ATH1 probeset): 254131_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21
3 AFC2; AME1; FC2  --  modify  --  RNPS1; SR45
4 AFC2; AME1; FC2  --  interacts with  --  At-RSZ22; RSZ22; RSZP22; SRZ-22; SRZ22
5 AFC2; AME1; FC2  --  interacts with  --  At-SCL33; ATSCL33; SCL33; SR33
6 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  interacts with  --  At-RS31; ATRSP31; RS31; RSP31
7 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  interacts with  --  AT5G62600
8 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  interacts with  --  AT2G43370
9 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=1.05626) with  --  emb1220
10 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=1.05626) with  --  AT3G60610
11 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.955931) with  --  GIF2
12 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.849329) with  --  AT1G05410
13 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.802575) with  --  SUE3; VIP1
14 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.824651) with  --  AT3G02280
15 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.821018) with  --  AT3G07220
16 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.821018) with  --  AT3G07260
17 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.882634) with  --  AT3G19630
18 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.888465) with  --  AT3G22220
19 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.941344) with  --  AT5G16505
20 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.852617) with  --  ATU2AF35B; U2AF35B
21 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.921559) with  --  AT5G46840
22 AFC2; AME1; FC2  --  modify  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.894074) with  --  AT5G49880
23 AFC2; AME1; FC2  --  modify  --  RNPS1; SR45  --  interacts with  --  ATU2AF35A
24 AFC2; AME1; FC2  --  modify  --  RNPS1; SR45  --  interacts with  --  AT3G24740
25 AFC2; AME1; FC2  --  modify  --  RNPS1; SR45  --  interacts with  --  SKIP
26 AFC2; AME1; FC2  --  interacts with  --  At-RSZ22; RSZ22; RSZP22; SRZ-22; SRZ22  --  interacts with  --  At-SCL30A; SCL30A
27 AFC2; AME1; FC2  --  interacts with  --  At-RSZ22; RSZ22; RSZP22; SRZ-22; SRZ22  --  interacts with  --  At-SCL30; SCL30
28 AFC2; AME1; FC2  --  interacts with  --  At-RSZ22; RSZ22; RSZP22; SRZ-22; SRZ22  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33
29 AFC2; AME1; FC2  --  interacts with  --  At-RSZ22; RSZ22; RSZP22; SRZ-22; SRZ22  --  has similar expression pattern (mutual information value=0.813595) with  --  ATRH53; PMH2
30 AFC2; AME1; FC2  --  interacts with  --  At-RSZ22; RSZ22; RSZP22; SRZ-22; SRZ22  --  has similar expression pattern (mutual information value=0.813595) with  --  ATRH9; PMH1
31 AFC2; AME1; FC2  --  interacts with  --  At-SCL33; ATSCL33; SCL33; SR33  --  interacts with  --  At-SCL28; SCL28
32 AFC2; AME1; FC2  --  interacts with  --  At-SCL33; ATSCL33; SCL33; SR33  --  interacts with  --  At-SC35; ATSC35; SC35
33 AFC2; AME1; FC2  --  interacts with  --  At-SCL33; ATSCL33; SCL33; SR33  --  interacts with  --  ATCYP59; CYP59
34 AFC2; AME1; FC2  --  interacts with  --  At-SCL33; ATSCL33; SCL33; SR33  --  has similar expression pattern (mutual information value=0.856502) with  --  EMB2776; LIS
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact