Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node CLPR4
Type: Protein GRN ID: np31054 Name: CLPR4
Annotation: CLPR4 | CLP protease R subunit 4
Gene Locus: AT4G17040
Gene Expression (Affy ATH1 probeset): 245400_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117
3 CLPR4  --  has similar expression pattern (mutual information value=0.947536) with  --  AT1G67280
4 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2
5 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346
6 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760
7 CLPR4  --  has similar expression pattern (mutual information value=0.855069) with  --  AT5G06130
8 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260
9 CLPR4  --  has similar expression pattern (mutual information value=0.816899) with  --  AT5G35100
10 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.47325) with  --  AT2G37660
11 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.35131) with  --  emb1473
12 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.29034) with  --  ALB-1V; ALB1; CHLD; PDE166; V157
13 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.52165) with  --  AT1G12800
14 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=0.893795) with  --  PDE326; PNP; RIF10
15 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.34576) with  --  AT3G08740
16 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.32834) with  --  RPL15
17 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=0.971722) with  --  EMB1865
18 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.33292) with  --  AT3G13120
19 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=0.840611) with  --  PDLP3
20 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.01367) with  --  PTAC14
21 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.27749) with  --  emb2726
22 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.43264) with  --  AT3G52150
23 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.59402) with  --  EMB3126
24 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=0.832517) with  --  54CP; CPSRP54; FFC; SRP54CP
25 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.37356) with  --  AT5G54600
26 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  has similar expression pattern (mutual information value=1.35245) with  --  HEMC
27 CLPR4  --  has similar expression pattern (mutual information value=0.837896) with  --  DEGP2; EMB3117  --  is the target gene of  --  ath-miR1886.1
28 CLPR4  --  has similar expression pattern (mutual information value=0.947536) with  --  AT1G67280  --  has similar expression pattern (mutual information value=0.928693) with  --  ALB3
29 CLPR4  --  has similar expression pattern (mutual information value=0.947536) with  --  AT1G67280  --  has similar expression pattern (mutual information value=1.19607) with  --  AT1G22700
30 CLPR4  --  has similar expression pattern (mutual information value=0.947536) with  --  AT1G67280  --  has similar expression pattern (mutual information value=0.842497) with  --  FZL
31 CLPR4  --  has similar expression pattern (mutual information value=0.947536) with  --  AT1G67280  --  has similar expression pattern (mutual information value=1.15627) with  --  CLPP6; NCLPP1; NCLPP6
32 CLPR4  --  has similar expression pattern (mutual information value=0.947536) with  --  AT1G67280  --  has similar expression pattern (mutual information value=0.950511) with  --  CLP2; CLPR2; EMB3146; NCLPP2
33 CLPR4  --  has similar expression pattern (mutual information value=0.947536) with  --  AT1G67280  --  has similar expression pattern (mutual information value=1.03419) with  --  HCF106
34 CLPR4  --  has similar expression pattern (mutual information value=0.947536) with  --  AT1G67280  --  has product (in catalytic reaction)  --  Methylglyoxal
35 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.941899) with  --  PSAP; PSI-P; PTAC8; TMP14
36 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.957493) with  --  AT2G35330
37 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=1.01462) with  --  AT1G22850
38 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.993716) with  --  AtTic55; Tic55; TIC55-II
39 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.845246) with  --  ATSIRB; SIRB
40 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.979312) with  --  AT1G64510
41 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.924517) with  --  AT1G29070
42 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.970368) with  --  ATHM4; ATM4; TRX-M4
43 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.999731) with  --  CCB1
44 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.955722) with  --  Deg1; DEGP1
45 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.923488) with  --  OHP2
46 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.984219) with  --  AT4G01150
47 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.966565) with  --  ATPC1
48 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.934352) with  --  PDE334
49 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=1.00409) with  --  ACSF; CHL27; CRD1
50 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=1.01628) with  --  RPL27
51 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=1.0036) with  --  AMK2
52 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.937077) with  --  AT5G51010
53 CLPR4  --  has similar expression pattern (mutual information value=1.19738) with  --  MSRB2  --  has similar expression pattern (mutual information value=0.921257) with  --  AtTic20-V; Tic20-V
54 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.83946) with  --  ATATH8
55 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.857021) with  --  PDE343; PTAC2
56 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.886315) with  --  AT1G01320
57 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.826002) with  --  ABCB28; ATNAP8; NAP8
58 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.997778) with  --  AT2G35490
59 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.09328) with  --  ATCPO-I; HEMF1; LIN2
60 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.09668) with  --  ATSCO1; ATSCO1/CPEF-G; SCO1
61 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.883861) with  --  ATDFC; DFC; FPGS2
62 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.06212) with  --  AT3G04760
63 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.03917) with  --  ATAB2
64 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.12016) with  --  AT3G12930
65 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.17112) with  --  ATRAB8D; ATRABE1B; RABE1b
66 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.01042) with  --  NARA5
67 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.04527) with  --  AT4G28080
68 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.848105) with  --  SQD1
69 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.08844) with  --  SBPASE
70 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.08591) with  --  APG1; E37; IEP37; VTE3
71 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.08514) with  --  ATEGY2; EGY2
72 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.12197) with  --  AT5G14460
73 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.92747) with  --  AT5G42310
74 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.992906) with  --  AT5G58330
75 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.990823) with  --  emb2746
76 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.059) with  --  ATG4; CHLG; G4; PDE325
77 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.09492) with  --  EMB3136
78 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=0.988036) with  --  AT4G16410
79 CLPR4  --  has similar expression pattern (mutual information value=0.845788) with  --  MRL1; PDE346  --  has similar expression pattern (mutual information value=1.05526) with  --  AT4G15510
80 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  interacts with  --  HCF164
81 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  interacts with  --  EDA3
82 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  interacts with  --  AT3G60370
83 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  interacts with  --  ATFKBP13; FKBP13
84 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  interacts with  --  AT5G45040
85 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  interacts with  --  AT1G12250
86 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  interacts with  --  AT5G53490
87 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  interacts with  --  Carotenoid biosynthesis
88 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  interacts with  --  OEC33; PSBO-2; PSBO2
89 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  interacts with  --  MSP-1; OE33; OEE1; OEE33; PSBO-1; PSBO1
90 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  has similar expression pattern (mutual information value=1.18573) with  --  AT2G26340
91 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  has similar expression pattern (mutual information value=1.05848) with  --  AT1G28150
92 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  has similar expression pattern (mutual information value=1.23109) with  --  AT3G23700
93 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  has similar expression pattern (mutual information value=0.98793) with  --  AT4G03150
94 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  has similar expression pattern (mutual information value=1.08073) with  --  AT5G51110
95 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  has similar expression pattern (mutual information value=0.892837) with  --  AT5G52190
96 CLPR4  --  has similar expression pattern (mutual information value=1.08718) with  --  AT4G35760  --  has similar expression pattern (mutual information value=0.860426) with  --  NF-YB3
97 CLPR4  --  has similar expression pattern (mutual information value=0.855069) with  --  AT5G06130  --  interacts with  --  psy
98 CLPR4  --  has similar expression pattern (mutual information value=0.855069) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.901451) with  --  AT1G04620
99 CLPR4  --  has similar expression pattern (mutual information value=0.855069) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.879039) with  --  AT1G02150
100 CLPR4  --  has similar expression pattern (mutual information value=0.855069) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.838646) with  --  AT1G60990
101 CLPR4  --  has similar expression pattern (mutual information value=0.855069) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.868888) with  --  AT3G20230
102 CLPR4  --  has similar expression pattern (mutual information value=0.855069) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.84122) with  --  CP29
103 CLPR4  --  has similar expression pattern (mutual information value=0.855069) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.829898) with  --  ATMTRNASEII; EMB2730; RNR1
104 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.08039) with  --  PSB27
105 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.17337) with  --  emb2394
106 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.03593) with  --  NDH-O
107 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.18421) with  --  RPS9; TWN3
108 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.25748) with  --  EMB2784; RPL4
109 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.04897) with  --  AT3G05350
110 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.17495) with  --  AT3G14420
111 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.17495) with  --  AT3G14415
112 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.18663) with  --  CHLM
113 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.10985) with  --  HCF136
114 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.06021) with  --  CLB4; CSB3; GCPE; HDS; ISPG
115 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.04817) with  --  DXR; PDE129
116 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.02872) with  --  AT5G16030
117 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  has similar expression pattern (mutual information value=1.16116) with  --  AT1G67700
118 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  interacts with  --  OBE1
119 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  interacts with  --  AtHEMA1; HEMA1
120 CLPR4  --  has similar expression pattern (mutual information value=0.905399) with  --  AT5G14260  --  interacts with  --  JAZ1
121 CLPR4  --  has similar expression pattern (mutual information value=0.816899) with  --  AT5G35100  --  has similar expression pattern (mutual information value=0.815507) with  --  ZFP8
122 CLPR4  --  has similar expression pattern (mutual information value=0.816899) with  --  AT5G35100  --  has product (in catalytic reaction)  --  Peptidylproline (omega=0)
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact