Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G60990
Type: Protein GRN ID: np11400 Name:
Annotation: Glycine cleavage T-protein family
Gene Locus: AT1G60990
Gene Expression (Affy ATH1 probeset): 259715_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2
3 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130
4 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=1.28444) with  --  ABC4
5 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=0.900385) with  --  AT2G04360
6 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=1.02003) with  --  ATSCO1; ATSCO1/CPEF-G; SCO1
7 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=0.805675) with  --  AT1G17100
8 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=1.26222) with  --  AT1G12800
9 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=1.09344) with  --  emb2768
10 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=0.840605) with  --  ATNHD1; NHD1
11 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=0.847882) with  --  SQD1
12 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=1.08514) with  --  MRL1; PDE346
13 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=1.00741) with  --  AT3G53560
14 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=1.23271) with  --  AT5G22340
15 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=1.03757) with  --  ARRPS1; RPS1
16 AT1G60990  --  has similar expression pattern (mutual information value=0.82348) with  --  ATEGY2; EGY2  --  has similar expression pattern (mutual information value=1.36769) with  --  EMB3136
17 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  interacts with  --  psy
18 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  has similar expression pattern (mutual information value=1.08675) with  --  AT1G67280
19 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.901451) with  --  AT1G04620
20 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.879039) with  --  AT1G02150
21 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.925725) with  --  AT1G01320
22 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.868888) with  --  AT3G20230
23 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.838373) with  --  AT3G52150
24 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.84122) with  --  CP29
25 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.916667) with  --  EMB3126
26 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.829898) with  --  ATMTRNASEII; EMB2730; RNR1
27 AT1G60990  --  has similar expression pattern (mutual information value=0.838646) with  --  AT5G06130  --  has similar expression pattern (mutual information value=0.855069) with  --  CLPR4
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact