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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G56900
Type: Protein GRN ID: np27043 Name:
Annotation: Transducin/WD40 repeat-like superfamily protein
Gene Locus: AT3G56900
Transcription factor /
transcriptional regulator:		 transcription factor family WD40-like
Gene Expression (Affy ATH1 probeset): 246317_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G56900  --  interacts with  --  FTSZ2-2
3 AT3G56900  --  interacts with  --  CSY3
4 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660
5 AT3G56900  --  has similar expression pattern (mutual information value=0.844959) with  --  emb2473; MIRO1
6 AT3G56900  --  interacts with  --  FTSZ2-2  --  interacts with  --  RPL12; RPL12-A
7 AT3G56900  --  interacts with  --  FTSZ2-2  --  interacts with  --  ATFTSZ2-1; FTSZ2-1
8 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.833848) with  --  AT2G21385
9 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.843314) with  --  ATSULA; GC1; SULA
10 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.880532) with  --  AT1G62780
11 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.944096) with  --  AT1G63610
12 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.834735) with  --  ABCI7; ATNAP6; NAP6
13 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.874175) with  --  AT1G36390
14 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.819971) with  --  PTAC13
15 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.830873) with  --  NDF4
16 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.861417) with  --  AT3G10840
17 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.808276) with  --  CP33; PDE322
18 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.802851) with  --  HEMG1; PPO1; PPOX
19 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.808519) with  --  AT4G19985
20 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.87746) with  --  ATRP1; RP1
21 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.818826) with  --  AT3G47650
22 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.845024) with  --  GSTL2
23 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.816564) with  --  AT3G58140
24 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.803793) with  --  AT5G42070
25 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.805877) with  --  CHL I2; CHLI-2; CHLI2
26 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.816714) with  --  CP31B
27 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.849572) with  --  ATG4; CHLG; G4; PDE325
28 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.85167) with  --  AT5G28500
29 AT3G56900  --  interacts with  --  FTSZ2-2  --  has similar expression pattern (mutual information value=0.82458) with  --  LIL3:1
30 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  AT5G67620
31 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  CHY1
32 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  AT5G25440
33 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  AT4G17760
34 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  CSY2
35 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  AT3G18380
36 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  CSY1
37 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  AT3G16120
38 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
39 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  ERF1-2
40 AT3G56900  --  interacts with  --  CSY3  --  interacts with  --  AT1G13520
41 AT3G56900  --  interacts with  --  CSY3  --  has product (in catalytic reaction)  --  Citrate
42 AT3G56900  --  interacts with  --  CSY3  --  is the target gene of  --  ath-miR5650
43 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=0.91306) with  --  AML1; ATRPS5A; RPS5A
44 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=1.04973) with  --  AT1G52930
45 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=1.00923) with  --  AT3G03920
46 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=0.808948) with  --  GYRA
47 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=1.15989) with  --  AT3G13160
48 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=1.04625) with  --  AT3G11250
49 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=0.985937) with  --  RID3
50 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=0.901403) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
51 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=0.896124) with  --  AT3G57940
52 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=1.10361) with  --  PYRD
53 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=1.18285) with  --  DegP9
54 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=0.872909) with  --  ATMSI1; MEE70; MSI1
55 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has similar expression pattern (mutual information value=0.837739) with  --  AT-RAB2; ATRAB-B1B; ATRAB2A; ATRABB1C; RAB-B1B; RAB2A; RABB1C
56 AT3G56900  --  has similar expression pattern (mutual information value=0.845319) with  --  AT1G63660  --  has product (in catalytic reaction)  --  GMP
57 AT3G56900  --  has similar expression pattern (mutual information value=0.844959) with  --  emb2473; MIRO1  --  interacts with  --  AT3G11850
58 AT3G56900  --  has similar expression pattern (mutual information value=0.844959) with  --  emb2473; MIRO1  --  interacts with  --  AT3G22550
59 AT3G56900  --  has similar expression pattern (mutual information value=0.844959) with  --  emb2473; MIRO1  --  has similar expression pattern (mutual information value=0.815995) with  --  AT4G20020
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