Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ERF1-2
Type: Protein GRN ID: np11139 Name: ERF1-2
Annotation: ERF1-2 | eukaryotic release factor 1-2
Gene Locus: AT1G12920
Gene Expression (Affy ATH1 probeset): 261204_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ERF1-2  --  interacts with  --  CSY2
3 ERF1-2  --  interacts with  --  CSY3
4 ERF1-2  --  interacts with  --  CSY2  --  has product (in catalytic reaction)  --  Citrate
5 ERF1-2  --  interacts with  --  CSY2  --  interacts with  --  ATSKL1; SKL1
6 ERF1-2  --  interacts with  --  CSY2  --  interacts with  --  AT1G25420
7 ERF1-2  --  interacts with  --  CSY3  --  interacts with  --  AT5G67620
8 ERF1-2  --  interacts with  --  CSY3  --  interacts with  --  CHY1
9 ERF1-2  --  interacts with  --  CSY3  --  interacts with  --  AT5G25440
10 ERF1-2  --  interacts with  --  CSY3  --  interacts with  --  AT4G17760
11 ERF1-2  --  interacts with  --  CSY3  --  interacts with  --  AT3G56900
12 ERF1-2  --  interacts with  --  CSY3  --  interacts with  --  AT3G18380
13 ERF1-2  --  interacts with  --  CSY3  --  interacts with  --  AT3G16120
14 ERF1-2  --  interacts with  --  CSY3  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
15 ERF1-2  --  interacts with  --  CSY3  --  interacts with  --  AT1G13520
16 ERF1-2  --  interacts with  --  CSY3  --  is the target gene of  --  ath-miR5650
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab