Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G17890
Type: Protein GRN ID: np26129 Name:
Annotation: unknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 10; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT3G17890
Gene Expression (Affy ATH1 probeset): 258211_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790
3 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830
4 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060
5 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.827121) with  --  emb1345
6 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.821896) with  --  HEN2
7 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.02507) with  --  AT2G18520
8 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.883303) with  --  ATTOM22-I; TOM22-I
9 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.978236) with  --  AT1G09660
10 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.864982) with  --  ATRRP4; RRP4
11 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.82475) with  --  AT1G09220
12 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.882088) with  --  AT1G54380
13 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.985103) with  --  AT1G11240
14 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.25255) with  --  AT1G07615
15 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.0692) with  --  AT1G05410
16 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.851577) with  --  NF-YC10
17 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.08308) with  --  CDC48C; emb1354
18 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.875603) with  --  AT3G03420
19 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.832937) with  --  AT3G05810
20 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.11411) with  --  GTE01; GTE1; IMB1
21 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.07517) with  --  AT3G19630
22 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.96511) with  --  AT2G34040
23 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.885426) with  --  AT1G76860
24 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.91515) with  --  AT4G01990
25 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.90343) with  --  ATMLH1; MLH1
26 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.11729) with  --  AT4G22350
27 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.11729) with  --  AT4G22285
28 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.804298) with  --  AT4G22720
29 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.814133) with  --  AT3G42860
30 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.10304) with  --  AT3G51270
31 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.942977) with  --  AT3G63400
32 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.849313) with  --  AT5G06180
33 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.800734) with  --  AT5G06110
34 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.912465) with  --  AT5G11310
35 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.08259) with  --  AT5G11760
36 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=1.13635) with  --  ABO1; AtELP1; ELO2
37 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.819296) with  --  AT5G13560
38 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.917987) with  --  MEF1
39 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.971497) with  --  AT5G61880
40 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.841012) with  --  AT5G63690
41 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.910629) with  --  AT5G25080
42 AT3G17890  --  has similar expression pattern (mutual information value=1.03638) with  --  AT2G47790  --  has similar expression pattern (mutual information value=0.896197) with  --  AT5G25800
43 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.818974) with  --  AT2G02880
44 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=1.03276) with  --  AT2G40780
45 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.891913) with  --  ASK3; SK3
46 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.997132) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A
47 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.843556) with  --  AT1G03760
48 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.825994) with  --  AT1G09320
49 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.818732) with  --  AT1G06530
50 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.960173) with  --  DRT111
51 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.968932) with  --  AT1G48560
52 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.837252) with  --  AT1G68980
53 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.863966) with  --  AT1G28060
54 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.843034) with  --  ATSUN2; SUN2
55 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.85643) with  --  AT3G04130
56 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.817224) with  --  AT4G17950
57 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.822375) with  --  AT4G27660
58 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=1.02443) with  --  EMB2752
59 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.814832) with  --  GAUT3
60 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.931193) with  --  AT3G62920
61 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.870458) with  --  AT5G13970
62 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.867344) with  --  AT5G14440
63 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.831292) with  --  AT5G18950
64 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=1.08498) with  --  AT5G51130
65 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.937029) with  --  NRPB6A; NRPD6A; NRPE6A
66 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.800193) with  --  AT5G54930
67 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.921999) with  --  AT5G63010
68 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=1.0513) with  --  AT5G30490
69 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=1.03983) with  --  AT5G15570
70 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=1.0451) with  --  AT4G37090
71 AT3G17890  --  has similar expression pattern (mutual information value=0.892577) with  --  AT1G12830  --  has similar expression pattern (mutual information value=0.835432) with  --  AT5G09390
72 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=1.03823) with  --  AT2G25720
73 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.885892) with  --  AT1G79200
74 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.965912) with  --  AT2G31725
75 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.807322) with  --  AT1G63980
76 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.819324) with  --  ATH4; ATTRX4
77 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.915466) with  --  AT1G49245
78 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.927048) with  --  AT2G43780
79 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.90714) with  --  MANIB; MNS1
80 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.813915) with  --  AT1G71060
81 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.957607) with  --  AT3G07590
82 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.815434) with  --  AtGRXS17; GRXS17
83 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.987953) with  --  rps15ae
84 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.845752) with  --  HMGB5; HMGD; NFD05; NFD5
85 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=1.10914) with  --  AT3G62810
86 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=1.09648) with  --  AT3G62840
87 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.842584) with  --  AT5G44710
88 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=1.02761) with  --  ATDSS1(V); DSS1(V)
89 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.827052) with  --  AT5G58990
90 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=0.827052) with  --  AT5G52370
91 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  has similar expression pattern (mutual information value=1.06708) with  --  AT5G57120
92 AT3G17890  --  has similar expression pattern (mutual information value=0.96537) with  --  AT5G42060  --  interacts with  --  AHK2
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab