Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node NRPD7
Type: Protein GRN ID: np26022 Name: NRPD7
Annotation: NRPD7 | RNA polymerase Rpb7-like, N-terminal domain
Gene Locus: AT3G22900
Gene Expression (Affy ATH1 probeset): 256837_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060
3 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.868112) with  --  AT2G45520
4 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.807979) with  --  AT2G37310
5 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.901093) with  --  AT3G26782
6 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.805939) with  --  AT4G02220
7 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.8752) with  --  AT3G49710
8 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.80884) with  --  AT5G22840
9 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.813915) with  --  AT5G42060
10 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.852386) with  --  AT5G50315
11 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.840588) with  --  MEF1
12 NRPD7  --  has similar expression pattern (mutual information value=0.985916) with  --  AT1G71060  --  is the target gene of  --  ath-miR3434-3p
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact