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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G49710
Type: Protein GRN ID: np24201 Name:
Annotation: Pentatricopeptide repeat (PPR) superfamily protein
Gene Locus: AT3G49710
Gene Expression (Affy ATH1 probeset): 252245_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520
3 AT3G49710  --  has similar expression pattern (mutual information value=0.804718) with  --  AT1G52640
4 AT3G49710  --  has similar expression pattern (mutual information value=0.8752) with  --  AT1G71060
5 AT3G49710  --  has similar expression pattern (mutual information value=0.811976) with  --  MEF22
6 AT3G49710  --  has similar expression pattern (mutual information value=0.954035) with  --  AT5G50315
7 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.819414) with  --  RPT2
8 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.941904) with  --  AT2G02880
9 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.856042) with  --  OSB4
10 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=1.05404) with  --  TIM13
11 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.902482) with  --  ATH4; ATTRX4
12 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.819811) with  --  AT3G05070
13 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.868155) with  --  AT4G01790
14 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.858512) with  --  AtGRXS17; GRXS17
15 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.879813) with  --  AT3G48210
16 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.841785) with  --  AT3G49725
17 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.874648) with  --  AT3G53342
18 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.874648) with  --  AT3G53630
19 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.874648) with  --  AT4G18692
20 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.874648) with  --  AT1G55710
21 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.850582) with  --  AT3G61360
22 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.923896) with  --  AT3G62840
23 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.965161) with  --  AT5G22840
24 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.920709) with  --  AT5G39800
25 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.920709) with  --  AT5G40080
26 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.8109) with  --  AT5G54930
27 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=0.842709) with  --  AT5G16060
28 AT3G49710  --  has similar expression pattern (mutual information value=0.814679) with  --  AT2G45520  --  has similar expression pattern (mutual information value=1.0247) with  --  AT4G37090
29 AT3G49710  --  has similar expression pattern (mutual information value=0.8752) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.807979) with  --  AT2G37310
30 AT3G49710  --  has similar expression pattern (mutual information value=0.8752) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.901093) with  --  AT3G26782
31 AT3G49710  --  has similar expression pattern (mutual information value=0.8752) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.985916) with  --  NRPD7
32 AT3G49710  --  has similar expression pattern (mutual information value=0.8752) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.805939) with  --  AT4G02220
33 AT3G49710  --  has similar expression pattern (mutual information value=0.8752) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.813915) with  --  AT5G42060
34 AT3G49710  --  has similar expression pattern (mutual information value=0.8752) with  --  AT1G71060  --  has similar expression pattern (mutual information value=0.840588) with  --  MEF1
35 AT3G49710  --  has similar expression pattern (mutual information value=0.8752) with  --  AT1G71060  --  is the target gene of  --  ath-miR3434-3p
36 AT3G49710  --  has similar expression pattern (mutual information value=0.811976) with  --  MEF22  --  has similar expression pattern (mutual information value=0.827125) with  --  AT3G15140
37 AT3G49710  --  has similar expression pattern (mutual information value=0.954035) with  --  AT5G50315  --  has similar expression pattern (mutual information value=0.866086) with  --  AT1G65700
38 AT3G49710  --  has similar expression pattern (mutual information value=0.954035) with  --  AT5G50315  --  has similar expression pattern (mutual information value=0.800891) with  --  AT1G69380
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