Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G42050
Type: Protein GRN ID: np24021 Name:
Annotation: vacuolar ATP synthase subunit H family protein [TCDB:9.B.17.1] [EC:3.6.3.14]
Gene Locus: AT3G42050
Gene Expression (Affy ATH1 probeset): 252845_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G42050  --  interacts with  --  AT4G13530
3 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  ATYLMG2; YLMG2
4 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  AT5G14030
5 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  AT3G61180
6 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  AT1G48040
7 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  WNK3
8 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  AT1G54320
9 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  FKBP16-2
10 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  AT5G42420
11 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  ATMTPB1; MTPB1
12 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  PLA IVD; PLP8
13 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  AT3G56200
14 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  ABCB25; ATATM3; ATM3; STA1
15 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  ATFBP7; FBP7
16 AT3G42050  --  interacts with  --  AT4G13530  --  interacts with  --  TED6
17 AT3G42050  --  interacts with  --  AT4G13530  --  has similar expression pattern (mutual information value=1.08036) with  --  AT1G44770
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact