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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G48040
Type: Protein GRN ID: np11653 Name:
Annotation: Protein phosphatase 2C family protein [EC:3.1.3.16]
Gene Locus: AT1G48040
Gene Expression (Affy ATH1 probeset): 260722_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G48040  --  interacts with  --  AT4G13530
3 AT1G48040  --  is the target gene of  --  ath-miR856
4 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  ATYLMG2; YLMG2
5 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  AT3G42050
6 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  AT5G14030
7 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  AT3G61180
8 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  WNK3
9 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  AT1G54320
10 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  FKBP16-2
11 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  AT5G42420
12 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  ATMTPB1; MTPB1
13 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  PLA IVD; PLP8
14 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  AT3G56200
15 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  ABCB25; ATATM3; ATM3; STA1
16 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  ATFBP7; FBP7
17 AT1G48040  --  interacts with  --  AT4G13530  --  interacts with  --  TED6
18 AT1G48040  --  interacts with  --  AT4G13530  --  has similar expression pattern (mutual information value=1.08036) with  --  AT1G44770
19 AT1G48040  --  is the target gene of  --  ath-miR856  --  inhibit the expression of  --  ATCHX18; CHX18
20 AT1G48040  --  is the target gene of  --  ath-miR856  --  inhibit the expression of  --  AT5G25920
21 AT1G48040  --  is the target gene of  --  ath-miR856  --  inhibit the expression of  --  AT3G10180
22 AT1G48040  --  is the target gene of  --  ath-miR856  --  inhibit the expression of  --  ATKT4; ATKUP3; KUP3
23 AT1G48040  --  is the target gene of  --  ath-miR856  --  inhibit the expression of  --  ATCDF1; ATMTP1; MTP1; ZAT; ZAT1
24 AT1G48040  --  is the target gene of  --  ath-miR856  --  inhibit the expression of  --  AT2G25610
25 AT1G48040  --  is the target gene of  --  ath-miR856  --  inhibit the expression of  --  AT1G11200
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