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Location:  Home > Details for node BIO2; BIOB
Type: Protein GRN ID: np22407 Name: BIO2; BIOB
Annotation: BIO2, BIOB | Radical SAM superfamily protein [EC:2.8.1.6]
Gene Locus: AT2G43360
Gene Expression (Affy ATH1 probeset): 260548_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 BIO2; BIOB  --  has product (in catalytic reaction)  --  5'-Deoxyadenosine
3 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine
4 BIO2; BIOB  --  has product (in catalytic reaction)  --  Biotin
5 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.806076) with  --  ARAPPT; CUE1; PPT
6 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.806076) with  --  AT1G43310
7 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230
8 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.856167) with  --  RTNLB3
9 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.00438) with  --  AT1G52670
10 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.86115) with  --  LTA2; PLE2
11 BIO2; BIOB  --  has product (in catalytic reaction)  --  5'-Deoxyadenosine  --  is product (in catalytic reaction) of  --  AT5G08415
12 BIO2; BIOB  --  has product (in catalytic reaction)  --  5'-Deoxyadenosine  --  is product (in catalytic reaction) of  --  Protein N6-(octanoyl)lysine
13 BIO2; BIOB  --  has product (in catalytic reaction)  --  5'-Deoxyadenosine  --  is product (in catalytic reaction) of  --  LIP1
14 BIO2; BIOB  --  has product (in catalytic reaction)  --  5'-Deoxyadenosine  --  is product (in catalytic reaction) of  --  Dethiobiotin
15 BIO2; BIOB  --  has product (in catalytic reaction)  --  5'-Deoxyadenosine  --  is product (in catalytic reaction) of  --  AT5G63290
16 BIO2; BIOB  --  has product (in catalytic reaction)  --  5'-Deoxyadenosine  --  is product (in catalytic reaction) of  --  Coproporphyrinogen III
17 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  has product (in catalytic reaction)  --  L-Methionyl-tRNA
18 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  has product (in catalytic reaction)  --  2-Aminobut-2-enoate
19 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  has product (in catalytic reaction)  --  2-Oxobutanoate
20 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  has product (in catalytic reaction)  --  Methanethiol
21 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  has product (in catalytic reaction)  --  S-Methyl-L-methionine
22 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  has product (in catalytic reaction)  --  L-Methionine (S)-S-oxide
23 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  has product (in catalytic reaction)  --  Thioredoxin
24 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  has product (in catalytic reaction)  --  Peptide-L-methionine (S)-S-oxide
25 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is product (in catalytic reaction) of  --  ATMS3; MS3
26 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is product (in catalytic reaction) of  --  L-Homocysteine
27 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is product (in catalytic reaction) of  --  5-Methyltetrahydropteroyltri-L-glutamate
28 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is product (in catalytic reaction) of  --  ATCIMS; ATMETS; ATMS1
29 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is product (in catalytic reaction) of  --  ATMS2; MS2
30 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is product (in catalytic reaction) of  --  ATHMT-2; HMT-2; HMT2
31 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is product (in catalytic reaction) of  --  ATHMT-1; HMT-1
32 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is product (in catalytic reaction) of  --  HMT3
33 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  NAD4L
34 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  APE2; TPT
35 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  ATPTR3; PTR3
36 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  AT5G46040
37 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  AT5G45450
38 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  ATDUR3; DUR3
39 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  AT5G45370
40 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  ZIP8
41 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  HMA7; RAN1
42 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  PHT4;6
43 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  ALA2
44 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  ABCI21; ATNAP2; ATPOP1; POP1
45 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  AT5G44050
46 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  ATSUC6; SUC6
47 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  AtMfl1; Mfl1
48 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  AT5G41800
49 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  AT5G40810
50 BIO2; BIOB  --  has product (in catalytic reaction)  --  L-Methionine  --  is transported by  --  LHT1
51 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.806076) with  --  ARAPPT; CUE1; PPT  --  transport  --  Chloric acid
52 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.806076) with  --  ARAPPT; CUE1; PPT  --  has similar expression pattern (mutual information value=0.826136) with  --  AT4G27640
53 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.806076) with  --  ARAPPT; CUE1; PPT  --  has similar expression pattern (mutual information value=0.844991) with  --  AT4G32390
54 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  interacts with  --  RTL1
55 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.945225) with  --  AT2G20270
56 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.829815) with  --  PDTPI; TIM
57 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.889343) with  --  WRKY4
58 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.864789) with  --  AT1G21610
59 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.992068) with  --  AT1G29760
60 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.922323) with  --  GLB1; PII
61 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.838694) with  --  AT4G08580
62 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.838694) with  --  AT5G17900
63 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.976623) with  --  ARI1; ATARI1
64 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.908201) with  --  NAGK
65 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.864229) with  --  AT3G61800
66 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.813389) with  --  AT5G04760
67 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.941545) with  --  DiT1
68 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.828542) with  --  BCCP; BCCP-1; BCCP1; CAC1; CAC1-A; CAC1A
69 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.910468) with  --  BAM4; BMY6
70 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.840725) with  --  AT5G63640
71 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.971281) with  --  DCT; DIT2.1
72 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has similar expression pattern (mutual information value=0.942783) with  --  ATATP-PRT1; ATP-PRT1; HISN1A
73 BIO2; BIOB  --  has similar expression pattern (mutual information value=1.02928) with  --  AT2G22230  --  has product (in catalytic reaction)  --  trans-2,3-Dehydroacyl-[acyl-carrier protein]
74 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.856167) with  --  RTNLB3  --  interacts with  --  BTI1; RTNLB1
75 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.856167) with  --  RTNLB3  --  interacts with  --  RTNLB13
76 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.856167) with  --  RTNLB3  --  has similar expression pattern (mutual information value=0.813988) with  --  ATSAR1; ATSAR1B; ATSARA1B; SAR1; SAR1B
77 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.86115) with  --  LTA2; PLE2  --  interacts with  --  ATCHIP; CHIP
78 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.86115) with  --  LTA2; PLE2  --  interacts with  --  RPT2a
79 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.86115) with  --  LTA2; PLE2  --  interacts with  --  EMB3003
80 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.86115) with  --  LTA2; PLE2  --  interacts with  --  AT3G25545
81 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.86115) with  --  LTA2; PLE2  --  interacts with  --  AT1G79070
82 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.86115) with  --  LTA2; PLE2  --  has similar expression pattern (mutual information value=1.14045) with  --  ENR1; MOD1
83 BIO2; BIOB  --  has similar expression pattern (mutual information value=0.86115) with  --  LTA2; PLE2  --  has similar expression pattern (mutual information value=0.812213) with  --  AT5G08535
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