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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G55830
Type: Protein GRN ID: np18289 Name:
Annotation: unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF812 (InterPro:IPR008530); Has 10940 Blast hits to 7289 proteins in 653 species: Archae - 228; Bacteria - 791; Metazoa - 6174; Fungi - 805; Plants - 342; Viruses - 19; Other Eukaryotes - 2581 (source: NCBI BLink). [TCDB:3.A.18.1] [TCDB:3.A.2.2] [TCDB:9.A.14.1]
Gene Locus: AT1G55830
Gene Expression (Affy ATH1 probeset): 264542_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B
3 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.808433) with  --  BRIZ1
4 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.874465) with  --  AT2G44200
5 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.813189) with  --  VPS2.1
6 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.853526) with  --  AT1G13880
7 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.828795) with  --  ATCHIP; CHIP
8 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.859182) with  --  AT3G13410
9 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.840422) with  --  EIF4B1
10 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.904971) with  --  AT3G46930
11 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.837935) with  --  AT3G48120
12 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.913576) with  --  AT3G55600
13 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.917788) with  --  AT5G06780
14 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.999369) with  --  NF-YB12
15 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.907072) with  --  AT5G13970
16 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.820226) with  --  AT5G14710
17 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=1.02548) with  --  AT1G25988
18 AT1G55830  --  has similar expression pattern (mutual information value=0.801782) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=1.02548) with  --  AT1G25682
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