Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATBCAT-1; BCAT-1
Type: Protein GRN ID: np17359 Name: ATBCAT-1; BCAT-1
Annotation: ATBCAT-1, BCAT-1 | branched-chain amino acid transaminase 1 [EC:2.6.1.42]
Gene Locus: AT1G10060
Gene Expression (Affy ATH1 probeset): 264525_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATBCAT-1; BCAT-1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate
3 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811
4 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.806748) with  --  AT3G47295
5 ATBCAT-1; BCAT-1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  L-Leucine
6 ATBCAT-1; BCAT-1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  AT5G57850
7 ATBCAT-1; BCAT-1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  ATIMD1; IMD1
8 ATBCAT-1; BCAT-1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  (2S)-2-Isopropyl-3-oxosuccinate
9 ATBCAT-1; BCAT-1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  (2R,3S)-3-Isopropylmalate
10 ATBCAT-1; BCAT-1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  ATIMD2; IMD2
11 ATBCAT-1; BCAT-1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  ATIMD3; IMD3; IPMDH1
12 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=0.864417) with  --  FDH; KCS10
13 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=0.825763) with  --  ABCG32; ATPDR4; PDR4; PEC1
14 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=0.87372) with  --  KCS8
15 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=0.900507) with  --  AT2G04570
16 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=0.879533) with  --  AT1G29670
17 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=0.896099) with  --  AT4G22490
18 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=0.817819) with  --  ABCB2; PGP2
19 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=0.877294) with  --  AT3G43720
20 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=1.17963) with  --  iqd21
21 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=1.11568) with  --  AT3G62820
22 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.834733) with  --  AT1G33811  --  has similar expression pattern (mutual information value=0.822882) with  --  AT5G55620
23 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.806748) with  --  AT3G47295  --  has similar expression pattern (mutual information value=0.908986) with  --  BLH4; SAW2
24 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.806748) with  --  AT3G47295  --  has similar expression pattern (mutual information value=0.806274) with  --  AT3G17070
25 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.806748) with  --  AT3G47295  --  has similar expression pattern (mutual information value=0.806274) with  --  AT3G42570
26 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.806748) with  --  AT3G47295  --  has similar expression pattern (mutual information value=0.868303) with  --  AT4G38690
27 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.806748) with  --  AT3G47295  --  has similar expression pattern (mutual information value=0.918008) with  --  AT5G14410
28 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.806748) with  --  AT3G47295  --  has similar expression pattern (mutual information value=0.819628) with  --  ATMIXTA; ATMYB16; MYB16
29 ATBCAT-1; BCAT-1  --  has similar expression pattern (mutual information value=0.806748) with  --  AT3G47295  --  has similar expression pattern (mutual information value=0.9232) with  --  AT5G18600
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab