Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATIMD3; IMD3; IPMDH1
Type: Protein GRN ID: np12665 Name: ATIMD3; IMD3; IPMDH1
Annotation: ATIMD3, IMD3, IPMDH1 | isopropylmalate dehydrogenase 3 [EC:1.1.1.85]
Gene Locus: AT1G31180
Gene Expression (Affy ATH1 probeset): 263706_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATIMD3; IMD3; IPMDH1  --  has product (in catalytic reaction)  --  (2S)-2-Isopropyl-3-oxosuccinate
3 ATIMD3; IMD3; IPMDH1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate
4 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2
5 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.831523) with  --  AK-HSDH; AK-HSDH I
6 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.806317) with  --  AK3
7 ATIMD3; IMD3; IPMDH1  --  has product (in catalytic reaction)  --  (2S)-2-Isopropyl-3-oxosuccinate  --  is product (in catalytic reaction) of  --  (2R,3S)-3-Isopropylmalate
8 ATIMD3; IMD3; IPMDH1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  ATBCAT-5
9 ATIMD3; IMD3; IPMDH1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  L-Leucine
10 ATIMD3; IMD3; IPMDH1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  AT5G57850
11 ATIMD3; IMD3; IPMDH1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  AT1G50110
12 ATIMD3; IMD3; IPMDH1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  AT1G50090
13 ATIMD3; IMD3; IPMDH1  --  has product (in catalytic reaction)  --  4-Methyl-2-oxopentanoate  --  is product (in catalytic reaction) of  --  ATBCAT-1; BCAT-1
14 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2  --  has product (in catalytic reaction)  --  2-Methylmaleate
15 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2  --  has product (in catalytic reaction)  --  2-Isopropylmaleate
16 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2  --  has product (in catalytic reaction)  --  alpha-Isopropylmalate
17 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2  --  has similar expression pattern (mutual information value=0.982409) with  --  AT2G31790
18 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2  --  has similar expression pattern (mutual information value=1.18084) with  --  ATGSTU20; GSTU20
19 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2  --  has similar expression pattern (mutual information value=1.0376) with  --  AT1G73600
20 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2  --  has similar expression pattern (mutual information value=1.0376) with  --  CPuORF32
21 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2  --  has similar expression pattern (mutual information value=1.09108) with  --  ATGSTF11; ATGSTF6; GSTF11
22 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2  --  has similar expression pattern (mutual information value=1.42014) with  --  BCAT4
23 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.887777) with  --  ATLEUD1; IPMI2  --  has similar expression pattern (mutual information value=1.05884) with  --  CYP83A1; REF2
24 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.831523) with  --  AK-HSDH; AK-HSDH I  --  has similar expression pattern (mutual information value=1.06927) with  --  ATBCAT-3; BCAT3
25 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.831523) with  --  AK-HSDH; AK-HSDH I  --  has similar expression pattern (mutual information value=1.05611) with  --  ATHDH; HDH; HISN8
26 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.831523) with  --  AK-HSDH; AK-HSDH I  --  has similar expression pattern (mutual information value=0.899014) with  --  ASN2
27 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.831523) with  --  AK-HSDH; AK-HSDH I  --  has similar expression pattern (mutual information value=0.895033) with  --  SBP1
28 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.831523) with  --  AK-HSDH; AK-HSDH I  --  has product (in catalytic reaction)  --  4-Phospho-L-aspartate
29 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.831523) with  --  AK-HSDH; AK-HSDH I  --  has product (in catalytic reaction)  --  L-Aspartate 4-semialdehyde
30 ATIMD3; IMD3; IPMDH1  --  has similar expression pattern (mutual information value=0.831523) with  --  AK-HSDH; AK-HSDH I  --  is regulated by  --  ATBZIP12; DPBF4; EEL
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab