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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G11860
Type: Protein GRN ID: np16040 Name:
Annotation: Glycine cleavage T-protein family [EC:2.1.2.10]
Gene Locus: AT1G11860
Gene Expression (Affy ATH1 probeset): 264394_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G11860  --  has product (in catalytic reaction)  --  5,10-Methylenetetrahydrofolate
3 AT1G11860  --  has similar expression pattern (mutual information value=0.896776) with  --  AT2G21210
4 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20
5 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17
6 AT1G11860  --  has similar expression pattern (mutual information value=1.0307) with  --  AT4G01310
7 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1
8 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160
9 AT1G11860  --  has product (in catalytic reaction)  --  5,10-Methylenetetrahydrofolate  --  has product (in catalytic reaction)  --  2-Dehydropantoate
10 AT1G11860  --  has product (in catalytic reaction)  --  5,10-Methylenetetrahydrofolate  --  has product (in catalytic reaction)  --  Tetrahydrofolate
11 AT1G11860  --  has product (in catalytic reaction)  --  5,10-Methylenetetrahydrofolate  --  has product (in catalytic reaction)  --  dTMP
12 AT1G11860  --  has product (in catalytic reaction)  --  5,10-Methylenetetrahydrofolate  --  has product (in catalytic reaction)  --  Dihydrofolate
13 AT1G11860  --  has product (in catalytic reaction)  --  5,10-Methylenetetrahydrofolate  --  is product (in catalytic reaction) of  --  S-Aminomethyldihydrolipoylprotein
14 AT1G11860  --  has product (in catalytic reaction)  --  5,10-Methylenetetrahydrofolate  --  is product (in catalytic reaction) of  --  MTHFR1
15 AT1G11860  --  has product (in catalytic reaction)  --  5,10-Methylenetetrahydrofolate  --  is product (in catalytic reaction) of  --  5-Methyltetrahydrofolate
16 AT1G11860  --  has product (in catalytic reaction)  --  5,10-Methylenetetrahydrofolate  --  is product (in catalytic reaction) of  --  MTHFR2
17 AT1G11860  --  has similar expression pattern (mutual information value=0.896776) with  --  AT2G21210  --  has similar expression pattern (mutual information value=0.885654) with  --  ATCAX1; CAX1; RCI4
18 AT1G11860  --  has similar expression pattern (mutual information value=0.896776) with  --  AT2G21210  --  has similar expression pattern (mutual information value=0.851554) with  --  TBL45
19 AT1G11860  --  has similar expression pattern (mutual information value=0.896776) with  --  AT2G21210  --  has similar expression pattern (mutual information value=0.812077) with  --  MLP423
20 AT1G11860  --  has similar expression pattern (mutual information value=0.896776) with  --  AT2G21210  --  has similar expression pattern (mutual information value=0.820452) with  --  ATBCA1; ATSABP3; CA1; SABP3
21 AT1G11860  --  has similar expression pattern (mutual information value=0.896776) with  --  AT2G21210  --  has similar expression pattern (mutual information value=0.998133) with  --  AT4G38840
22 AT1G11860  --  has similar expression pattern (mutual information value=0.896776) with  --  AT2G21210  --  has similar expression pattern (mutual information value=0.959256) with  --  ATGSL1; GLN2; GS2
23 AT1G11860  --  has similar expression pattern (mutual information value=0.896776) with  --  AT2G21210  --  has similar expression pattern (mutual information value=0.836763) with  --  AtMYB28; HAG1; MYB28; PMG1
24 AT1G11860  --  has similar expression pattern (mutual information value=0.896776) with  --  AT2G21210  --  has similar expression pattern (mutual information value=0.919485) with  --  AT5G13140
25 AT1G11860  --  has similar expression pattern (mutual information value=0.896776) with  --  AT2G21210  --  has similar expression pattern (mutual information value=0.957017) with  --  AT4G16980
26 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=1.18084) with  --  ATLEUD1; IPMI2
27 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=0.811419) with  --  AT1G09750
28 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=0.956384) with  --  AT1G61690
29 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=0.852263) with  --  GTE4
30 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=0.988396) with  --  AT1G73600
31 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=0.988396) with  --  CPuORF32
32 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=0.890819) with  --  ESM1?
33 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=0.929196) with  --  BASS5; BAT5
34 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=1.01608) with  --  CYP83A1; REF2
35 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=0.881676) with  --  AT5G16680
36 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=0.827242) with  --  AT5G66530
37 AT1G11860  --  has similar expression pattern (mutual information value=0.821004) with  --  ATGSTU20; GSTU20  --  has similar expression pattern (mutual information value=0.800412) with  --  ATE2FB; E2F1; E2FB
38 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=1.53865) with  --  AT2G37660
39 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=1.56312) with  --  PSRP4
40 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=1.61915) with  --  AT2G24090
41 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=1.17876) with  --  AT2G37220
42 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=1.48181) with  --  emb2394
43 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=1.65673) with  --  emb1473
44 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=1.61735) with  --  PRPL11
45 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=1.53107) with  --  AT1G29070
46 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=1.59636) with  --  RPL15
47 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=0.839446) with  --  AT5G25770
48 AT1G11860  --  has similar expression pattern (mutual information value=1.09535) with  --  CS17; PDE347; PRPS17; RPS17  --  has similar expression pattern (mutual information value=1.59023) with  --  RPL9
49 AT1G11860  --  has similar expression pattern (mutual information value=1.0307) with  --  AT4G01310  --  has similar expression pattern (mutual information value=1.2512) with  --  ABC1; ATSIG1; ATSIG2; SIG1; SIG2; SIGA; SIGB
50 AT1G11860  --  has similar expression pattern (mutual information value=1.0307) with  --  AT4G01310  --  has similar expression pattern (mutual information value=0.998012) with  --  PDTPI; TIM
51 AT1G11860  --  has similar expression pattern (mutual information value=1.0307) with  --  AT4G01310  --  has similar expression pattern (mutual information value=1.57838) with  --  AT1G64510
52 AT1G11860  --  has similar expression pattern (mutual information value=1.0307) with  --  AT4G01310  --  has similar expression pattern (mutual information value=1.45807) with  --  EMB2784; RPL4
53 AT1G11860  --  has similar expression pattern (mutual information value=1.0307) with  --  AT4G01310  --  has similar expression pattern (mutual information value=1.68884) with  --  AT3G13120
54 AT1G11860  --  has similar expression pattern (mutual information value=1.0307) with  --  AT4G01310  --  has similar expression pattern (mutual information value=0.810691) with  --  PDLP3
55 AT1G11860  --  has similar expression pattern (mutual information value=1.0307) with  --  AT4G01310  --  has similar expression pattern (mutual information value=1.39233) with  --  AtcpRRF; cpRRF; HFP108; RRF
56 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.04084) with  --  AT2G42220
57 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.0582) with  --  GAPA-2
58 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.00485) with  --  AT1G74470
59 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=0.927696) with  --  AT3G14420
60 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=0.927696) with  --  AT3G14415
61 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.06827) with  --  LHCB2; LHCB2.3; LHCB2.4
62 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=0.855841) with  --  AT3G28040
63 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.02275) with  --  UNE10
64 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=0.986815) with  --  AT4G01150
65 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.03994) with  --  PSAD-1
66 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=0.971237) with  --  AT4G10060
67 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.09076) with  --  AT4G28080
68 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.019) with  --  AT4G35250
69 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.01949) with  --  SHM1; SHMT1; STM
70 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.11936) with  --  AT3G48200
71 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.06218) with  --  SBPASE
72 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.02199) with  --  ACSF; CHL27; CRD1
73 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.06859) with  --  GUN4
74 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.04) with  --  psy
75 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=0.811745) with  --  BETA CA2; CA18; CA2
76 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=0.887372) with  --  AT5G21100
77 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=1.07161) with  --  FD-GOGAT; GLS1; GLU1; GLUS
78 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=0.983719) with  --  RCA
79 AT1G11860  --  has similar expression pattern (mutual information value=0.839209) with  --  ACA1; ATACA1; CAH1  --  has similar expression pattern (mutual information value=0.920804) with  --  NDHC
80 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.906182) with  --  EMB3113
81 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.83766) with  --  NGA1
82 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.90248) with  --  AT2G35410
83 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.926249) with  --  RPS9; TWN3
84 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.901217) with  --  TCP3
85 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.917578) with  --  HEME1
86 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.922085) with  --  AT3G15190
87 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.851967) with  --  CXC750; ECS1
88 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.891888) with  --  ATHM2
89 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.983727) with  --  ATFKBP13; FKBP13
90 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.891694) with  --  AT5G55450
91 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=1.17701) with  --  AT5G20935
92 AT1G11860  --  has similar expression pattern (mutual information value=0.991422) with  --  AT3G63160  --  has similar expression pattern (mutual information value=0.837206) with  --  ATGER3; GER3; GLP3; GLP3A; GLP3B
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