Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AT1G15215

Type: Protein	GRN ID: np15625	Name:
Annotation:	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus:	AT1G15215
Gene Expression (Affy ATH1 probeset):

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

Ignore nodes having > relationships

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AT1G15215 -- interacts with -- RDR2; SMD1
3	AT1G15215 -- interacts with -- CHR38; CLSY; CLSY1
4	AT1G15215 -- interacts with -- RDR2; SMD1 -- has product (in catalytic reaction) -- RNA
5	AT1G15215 -- interacts with -- RDR2; SMD1 -- has similar expression pattern (mutual information value=0.811583) with -- KIPK
6	AT1G15215 -- interacts with -- CHR38; CLSY; CLSY1 -- is the target gene of -- ath-miR414

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