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Location:  Home > Details for node AT1G54540
Type: Protein GRN ID: np13467 Name:
Annotation: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Gene Locus: AT1G54540
Gene Expression (Affy ATH1 probeset): 263005_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G54540  --  interacts with  --  AT1G07650
3 AT1G54540  --  interacts with  --  ATL4; TL4
4 AT1G54540  --  interacts with  --  AT5G24010
5 AT1G54540  --  interacts with  --  CRK31
6 AT1G54540  --  interacts with  --  AT1G61420
7 AT1G54540  --  interacts with  --  AT5G41180
8 AT1G54540  --  interacts with  --  AT1G49230
9 AT1G54540  --  interacts with  --  AT2G39510
10 AT1G54540  --  interacts with  --  ATCNGC9; CNGC9
11 AT1G54540  --  interacts with  --  AOX2
12 AT1G54540  --  has similar expression pattern (mutual information value=0.805445) with  --  AT2G22510
13 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130
14 AT1G54540  --  has similar expression pattern (mutual information value=0.831106) with  --  AT1G68850
15 AT1G54540  --  has similar expression pattern (mutual information value=0.890927) with  --  PELPK2
16 AT1G54540  --  has similar expression pattern (mutual information value=0.855058) with  --  AT4G36610
17 AT1G54540  --  interacts with  --  AT1G07650  --  interacts with  --  AT2G16030
18 AT1G54540  --  interacts with  --  AT1G07650  --  interacts with  --  AT3G26370
19 AT1G54540  --  interacts with  --  AT1G07650  --  interacts with  --  AT1G34470
20 AT1G54540  --  interacts with  --  AT1G07650  --  transport  --  Biopterin
21 AT1G54540  --  interacts with  --  AT1G07650  --  transport  --  Methotrexate
22 AT1G54540  --  interacts with  --  AT1G07650  --  transport  --  Folate
23 AT1G54540  --  interacts with  --  AT1G07650  --  has similar expression pattern (mutual information value=0.874151) with  --  AT1G29670
24 AT1G54540  --  interacts with  --  AT1G07650  --  has similar expression pattern (mutual information value=0.85608) with  --  AT4G38690
25 AT1G54540  --  interacts with  --  ATL4; TL4  --  interacts with  --  ATSMO1-2; SMO1-2
26 AT1G54540  --  interacts with  --  ATL4; TL4  --  interacts with  --  PIN4
27 AT1G54540  --  interacts with  --  AT5G24010  --  interacts with  --  AT4G05370
28 AT1G54540  --  interacts with  --  AT5G24010  --  interacts with  --  AT2G23770
29 AT1G54540  --  interacts with  --  CRK31  --  interacts with  --  AT4G27610
30 AT1G54540  --  interacts with  --  CRK31  --  interacts with  --  AT3G25805
31 AT1G54540  --  interacts with  --  CRK31  --  interacts with  --  AT4G00670
32 AT1G54540  --  interacts with  --  CRK31  --  interacts with  --  WNK3
33 AT1G54540  --  interacts with  --  CRK31  --  interacts with  --  HHP1
34 AT1G54540  --  interacts with  --  CRK31  --  interacts with  --  AtMAPR5; ATMP1; MSBP1
35 AT1G54540  --  interacts with  --  AT1G61420  --  interacts with  --  AT3G18800
36 AT1G54540  --  interacts with  --  AT1G61420  --  interacts with  --  AT2G28990
37 AT1G54540  --  interacts with  --  AT1G61420  --  interacts with  --  PR5K
38 AT1G54540  --  interacts with  --  AT1G61420  --  interacts with  --  AT2G24250
39 AT1G54540  --  interacts with  --  AT1G61420  --  interacts with  --  AT1G20490
40 AT1G54540  --  interacts with  --  AT1G61420  --  interacts with  --  AtPSKR2; PSKR2
41 AT1G54540  --  interacts with  --  AT1G61420  --  is the target gene of  --  ath-miR836
42 AT1G54540  --  interacts with  --  AT5G41180  --  interacts with  --  HAE; RLK5
43 AT1G54540  --  interacts with  --  AT1G49230  --  interacts with  --  AT5G03345
44 AT1G54540  --  interacts with  --  AT1G49230  --  interacts with  --  AT1G76185
45 AT1G54540  --  interacts with  --  AT1G49230  --  interacts with  --  GAE5
46 AT1G54540  --  interacts with  --  AT1G49230  --  interacts with  --  AT1G14020
47 AT1G54540  --  interacts with  --  AT1G49230  --  interacts with  --  AT4G17430
48 AT1G54540  --  interacts with  --  AT1G49230  --  interacts with  --  AT4G01410
49 AT1G54540  --  interacts with  --  AT1G49230  --  interacts with  --  AT1G11940
50 AT1G54540  --  interacts with  --  AT1G49230  --  interacts with  --  AT4G37445
51 AT1G54540  --  interacts with  --  AT1G49230  --  interacts with  --  ELIP2
52 AT1G54540  --  interacts with  --  AT1G49230  --  interacts with  --  UBC10
53 AT1G54540  --  interacts with  --  ATCNGC9; CNGC9  --  interacts with  --  AT3G03210
54 AT1G54540  --  interacts with  --  ATCNGC9; CNGC9  --  interacts with  --  CRK40
55 AT1G54540  --  interacts with  --  ATCNGC9; CNGC9  --  interacts with  --  ATCLH1; ATHCOR1; CLH1; CORI1
56 AT1G54540  --  interacts with  --  ATCNGC9; CNGC9  --  interacts with  --  ABCG10
57 AT1G54540  --  interacts with  --  ATCNGC9; CNGC9  --  interacts with  --  ACBK1; ATCNGC10; CNGC10
58 AT1G54540  --  interacts with  --  ATCNGC9; CNGC9  --  interacts with  --  ATKCO1; ATTPK1; KCO1; KCO1; TPK1
59 AT1G54540  --  interacts with  --  ATCNGC9; CNGC9  --  interacts with  --  ATCPK1; CPK1
60 AT1G54540  --  interacts with  --  ATCNGC9; CNGC9  --  transport  --  Sugar
61 AT1G54540  --  interacts with  --  AOX2  --  interacts with  --  AT3G22060
62 AT1G54540  --  interacts with  --  AOX2  --  has product (in catalytic reaction)  --  Ubiquinone
63 AT1G54540  --  has similar expression pattern (mutual information value=0.805445) with  --  AT2G22510  --  interacts with  --  AT1G01240
64 AT1G54540  --  has similar expression pattern (mutual information value=0.805445) with  --  AT2G22510  --  has similar expression pattern (mutual information value=0.865518) with  --  AT2G23540
65 AT1G54540  --  has similar expression pattern (mutual information value=0.805445) with  --  AT2G22510  --  has similar expression pattern (mutual information value=1.13701) with  --  AT1G74460
66 AT1G54540  --  has similar expression pattern (mutual information value=0.805445) with  --  AT2G22510  --  has similar expression pattern (mutual information value=0.917689) with  --  AT4G38080
67 AT1G54540  --  has similar expression pattern (mutual information value=0.805445) with  --  AT2G22510  --  has similar expression pattern (mutual information value=0.901944) with  --  PELPK1; PRP10
68 AT1G54540  --  has similar expression pattern (mutual information value=0.805445) with  --  AT2G22510  --  has similar expression pattern (mutual information value=0.902994) with  --  AT5G37690
69 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=1.05513) with  --  AT2G38380
70 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=1.05513) with  --  AT2G38390
71 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=0.819771) with  --  CASP3
72 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=0.852742) with  --  AT2G16760
73 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=1.01231) with  --  EDA4
74 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=0.912161) with  --  AT1G18980
75 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=0.857967) with  --  AT4G30670
76 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=0.905389) with  --  FAR4
77 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=0.915226) with  --  AT3G45710
78 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=0.974854) with  --  AT5G38030
79 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=1.09464) with  --  AT5G41040
80 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=0.851969) with  --  AT5G42180
81 AT1G54540  --  has similar expression pattern (mutual information value=0.853643) with  --  AT2G48130  --  has similar expression pattern (mutual information value=0.846714) with  --  CYP708 A2; CYP708A2; THAH; THAH1
82 AT1G54540  --  has similar expression pattern (mutual information value=0.831106) with  --  AT1G68850  --  has similar expression pattern (mutual information value=0.800385) with  --  AT1G56320
83 AT1G54540  --  has similar expression pattern (mutual information value=0.831106) with  --  AT1G68850  --  has similar expression pattern (mutual information value=0.934305) with  --  CYP86; CYP86A1
84 AT1G54540  --  has similar expression pattern (mutual information value=0.890927) with  --  PELPK2  --  has similar expression pattern (mutual information value=0.88015) with  --  ATGPAT5; GPAT5
85 AT1G54540  --  has similar expression pattern (mutual information value=0.855058) with  --  AT4G36610  --  has similar expression pattern (mutual information value=0.899823) with  --  AtMYB93; MYB93
86 AT1G54540  --  has similar expression pattern (mutual information value=0.855058) with  --  AT4G36610  --  has similar expression pattern (mutual information value=0.816692) with  --  AT3G06390
87 AT1G54540  --  has similar expression pattern (mutual information value=0.855058) with  --  AT4G36610  --  has similar expression pattern (mutual information value=1.02204) with  --  ABCG6
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