Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node POLD4
Type: Protein GRN ID: np12140 Name: POLD4
Annotation: POLD4 | polymerase delta 4
Gene Locus: AT1G09815
Gene Expression (Affy ATH1 probeset): 264674_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I
3 POLD4  --  has similar expression pattern (mutual information value=0.81118) with  --  AtCESA1; CESA1; RSW1
4 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.883303) with  --  AT2G47790
5 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.834838) with  --  AT2G25720
6 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.928859) with  --  ASK3; SK3
7 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.880152) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A
8 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.859022) with  --  DRT111
9 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.925328) with  --  AT1G12830
10 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.805695) with  --  AT3G03420
11 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.896632) with  --  AT4G22350
12 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.896632) with  --  AT4G22285
13 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.857108) with  --  EMB2752
14 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.807771) with  --  AT3G49100
15 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.91507) with  --  AT3G62920
16 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.913088) with  --  NRPB6A; NRPD6A; NRPE6A
17 POLD4  --  has similar expression pattern (mutual information value=0.92397) with  --  ATTOM22-I; TOM22-I  --  has similar expression pattern (mutual information value=0.860375) with  --  AT5G61880
18 POLD4  --  has similar expression pattern (mutual information value=0.81118) with  --  AtCESA1; CESA1; RSW1  --  interacts with  --  ATGH9A1; DEC; GH9A1; IRX2; KOR; KOR1; RSW2; TSD1
19 POLD4  --  has similar expression pattern (mutual information value=0.81118) with  --  AtCESA1; CESA1; RSW1  --  interacts with  --  CSI1
20 POLD4  --  has similar expression pattern (mutual information value=0.81118) with  --  AtCESA1; CESA1; RSW1  --  interacts with  --  ATCESA8; CESA8; IRX1; LEW2
21 POLD4  --  has similar expression pattern (mutual information value=0.81118) with  --  AtCESA1; CESA1; RSW1  --  interacts with  --  ATCESA7; CESA7; IRX3; MUR10
22 POLD4  --  has similar expression pattern (mutual information value=0.81118) with  --  AtCESA1; CESA1; RSW1  --  interacts with  --  CESA4; IRX5; NWS2
23 POLD4  --  has similar expression pattern (mutual information value=0.81118) with  --  AtCESA1; CESA1; RSW1  --  interacts with  --  ATCESA3
24 POLD4  --  has similar expression pattern (mutual information value=0.81118) with  --  AtCESA1; CESA1; RSW1  --  interacts with  --  CESA6; E112; IXR2; PRC1
25 POLD4  --  has similar expression pattern (mutual information value=0.81118) with  --  AtCESA1; CESA1; RSW1  --  interacts with  --  AT3G15800
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab