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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G05650
Type: Protein GRN ID: np11652 Name:
Annotation: Pectin lyase-like superfamily protein
Gene Locus: AT1G05650
Gene Expression (Affy ATH1 probeset): 263229_s_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320
3 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=1.04342) with  --  AGP30; ATAGP30
4 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=0.902264) with  --  RGF3
5 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=0.819668) with  --  AT1G05660
6 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=0.918978) with  --  AT1G50060
7 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=0.971908) with  --  ADF11
8 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=0.892158) with  --  LBD13
9 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=0.902906) with  --  AT4G28650
10 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=0.811441) with  --  AT4G29690
11 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=1.1689) with  --  AT5G10130
12 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=0.937336) with  --  AT5G14150
13 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=0.914475) with  --  AT5G54370
14 AT1G05650  --  has similar expression pattern (mutual information value=0.819668) with  --  AT4G31320  --  has similar expression pattern (mutual information value=0.81475) with  --  ATMYB66; MYB66; WER; WER1
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