Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATPME2; PME2
Type: Protein GRN ID: np11269 Name: ATPME2; PME2
Annotation: ATPME2, PME2 | pectin methylesterase 2 [EC:3.1.1.11]
Gene Locus: AT1G53830
Gene Expression (Affy ATH1 probeset): 262198_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate
3 ATPME2; PME2  --  has product (in catalytic reaction)  --  Methanol
4 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370
5 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.803125) with  --  NIC3
6 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  QRT1
7 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  Pectin
8 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT5G51500
9 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT5G51490
10 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT5G49180
11 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT5G27870
12 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT5G19730
13 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT5G04970
14 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  ATPME44; PME44
15 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT4G03930
16 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  ATPMEPCRB
17 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT4G02320
18 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT3G47400
19 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT3G43270
20 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  ATPME31; PME31
21 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  ATPME3; PME3
22 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT3G10720
23 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT3G05620
24 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT3G05610
25 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT2G47550
26 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  VGDH1
27 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT2G45220
28 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  ATPE11; PE11
29 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  ATPPME1; PPME1
30 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT1G11590
31 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  ATPMEPCRA; PMEPCRA
32 ATPME2; PME2  --  has product (in catalytic reaction)  --  Pectate  --  is product (in catalytic reaction) of  --  AT1G02810
33 ATPME2; PME2  --  has product (in catalytic reaction)  --  Methanol  --  is product (in catalytic reaction) of  --  AT4G10050
34 ATPME2; PME2  --  has product (in catalytic reaction)  --  Methanol  --  is product (in catalytic reaction) of  --  ATMES16; MES16
35 ATPME2; PME2  --  has product (in catalytic reaction)  --  Methanol  --  is product (in catalytic reaction) of  --  Pheophorbide a
36 ATPME2; PME2  --  has product (in catalytic reaction)  --  Methanol  --  is product (in catalytic reaction) of  --  AtHNL; ATMES5; HNL; MES5
37 ATPME2; PME2  --  has product (in catalytic reaction)  --  Methanol  --  is product (in catalytic reaction) of  --  Polyneuridine aldehyde
38 ATPME2; PME2  --  has product (in catalytic reaction)  --  Methanol  --  is product (in catalytic reaction) of  --  AtMES9
39 ATPME2; PME2  --  has product (in catalytic reaction)  --  Methanol  --  is product (in catalytic reaction) of  --  ATMES3; MES3
40 ATPME2; PME2  --  has product (in catalytic reaction)  --  Methanol  --  is product (in catalytic reaction) of  --  AtMES2
41 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=1.0124) with  --  CYP705A8
42 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=0.897644) with  --  ATRBOHB; ATRBOHB-BETA; RBOHB
43 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=0.902634) with  --  AT1G12080
44 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=1.02052) with  --  BGLU21
45 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=1.02052) with  --  BGLU22
46 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=0.839477) with  --  scpl6
47 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=1.09568) with  --  ATMLP-300B; MEE36; MLP-300B
48 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=0.919672) with  --  AT3G16460
49 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=1.13908) with  --  AT3G01190
50 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=0.927751) with  --  AGP13
51 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=0.918488) with  --  AT4G31100
52 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=0.854594) with  --  AT5G48110
53 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370  --  has similar expression pattern (mutual information value=0.820123) with  --  ATMAP70-5; MAP70-5
54 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.803125) with  --  NIC3  --  interacts with  --  NIC2
55 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.803125) with  --  NIC3  --  has similar expression pattern (mutual information value=0.887557) with  --  CYP705A25
56 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.803125) with  --  NIC3  --  has similar expression pattern (mutual information value=0.925217) with  --  AT4G02090
57 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.803125) with  --  NIC3  --  has similar expression pattern (mutual information value=0.9139) with  --  ENDO5
58 ATPME2; PME2  --  has similar expression pattern (mutual information value=0.803125) with  --  NIC3  --  has similar expression pattern (mutual information value=0.884491) with  --  GMD1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab