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Location:  Home > Details for node Pectate
Type: Compound GRN ID: nc50470 Name: Pectate
Annotation: Pectate; Pectic acid; alpha-D-Polygalacturonic acid; Poly(1,4-alpha-D-galacturonate); Poly(1,4-alpha-D-galacturonate)(n); (1,4-alpha-D-Galacturonide)n; (1,4-alpha-D-Galacturonosyl)n; De-esterified pectin
KEGG Acc.: C00470
CHEBI ID:
Formula: C12H18O13(C6H8O6)n-2
M.W.: 0.0
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 Pectate  --  is product (in catalytic reaction) of  --  QRT1
3 Pectate  --  is product (in catalytic reaction) of  --  Pectin
4 Pectate  --  is product (in catalytic reaction) of  --  AT5G51500
5 Pectate  --  is product (in catalytic reaction) of  --  AT5G51490
6 Pectate  --  is product (in catalytic reaction) of  --  AT5G49180
7 Pectate  --  is product (in catalytic reaction) of  --  AT5G27870
8 Pectate  --  is product (in catalytic reaction) of  --  AT5G19730
9 Pectate  --  is product (in catalytic reaction) of  --  AT5G04970
10 Pectate  --  is product (in catalytic reaction) of  --  ATPME44; PME44
11 Pectate  --  is product (in catalytic reaction) of  --  AT4G03930
12 Pectate  --  is product (in catalytic reaction) of  --  ATPMEPCRB
13 Pectate  --  is product (in catalytic reaction) of  --  AT4G02320
14 Pectate  --  is product (in catalytic reaction) of  --  AT3G47400
15 Pectate  --  is product (in catalytic reaction) of  --  AT3G43270
16 Pectate  --  is product (in catalytic reaction) of  --  ATPME31; PME31
17 Pectate  --  is product (in catalytic reaction) of  --  ATPME3; PME3
18 Pectate  --  is product (in catalytic reaction) of  --  AT3G10720
19 Pectate  --  is product (in catalytic reaction) of  --  AT3G05620
20 Pectate  --  is product (in catalytic reaction) of  --  AT3G05610
21 Pectate  --  is product (in catalytic reaction) of  --  AT2G47550
22 Pectate  --  is product (in catalytic reaction) of  --  VGDH1
23 Pectate  --  is product (in catalytic reaction) of  --  AT2G45220
24 Pectate  --  is product (in catalytic reaction) of  --  ATPE11; PE11
25 Pectate  --  is product (in catalytic reaction) of  --  ATPPME1; PPME1
26 Pectate  --  is product (in catalytic reaction) of  --  ATPME2; PME2
27 Pectate  --  is product (in catalytic reaction) of  --  AT1G11590
28 Pectate  --  is product (in catalytic reaction) of  --  ATPMEPCRA; PMEPCRA
29 Pectate  --  is product (in catalytic reaction) of  --  AT1G02810
30 Pectate  --  is product (in catalytic reaction) of  --  QRT1  --  has product (in catalytic reaction)  --  Methanol
31 Pectate  --  is product (in catalytic reaction) of  --  AT5G04970  --  has similar expression pattern (mutual information value=1.02139) with  --  CYP705A8
32 Pectate  --  is product (in catalytic reaction) of  --  AT5G04970  --  has similar expression pattern (mutual information value=0.83816) with  --  AT3G04320
33 Pectate  --  is product (in catalytic reaction) of  --  AT5G04970  --  has similar expression pattern (mutual information value=0.83816) with  --  AT3G04330
34 Pectate  --  is product (in catalytic reaction) of  --  AT5G04970  --  has similar expression pattern (mutual information value=0.96261) with  --  AT5G60530
35 Pectate  --  is product (in catalytic reaction) of  --  ATPME44; PME44  --  has similar expression pattern (mutual information value=1.00728) with  --  AT1G09310
36 Pectate  --  is product (in catalytic reaction) of  --  ATPME44; PME44  --  has similar expression pattern (mutual information value=0.81369) with  --  MUB5
37 Pectate  --  is product (in catalytic reaction) of  --  ATPME44; PME44  --  has similar expression pattern (mutual information value=1.07505) with  --  AT3G16370
38 Pectate  --  is product (in catalytic reaction) of  --  ATPME44; PME44  --  has similar expression pattern (mutual information value=0.841213) with  --  ATT1; CYP86A2
39 Pectate  --  is product (in catalytic reaction) of  --  ATPME44; PME44  --  has similar expression pattern (mutual information value=0.829939) with  --  CER2; VC-2; VC2
40 Pectate  --  is product (in catalytic reaction) of  --  ATPME44; PME44  --  has similar expression pattern (mutual information value=0.895092) with  --  AT5G01790
41 Pectate  --  is product (in catalytic reaction) of  --  ATPME44; PME44  --  has similar expression pattern (mutual information value=0.869185) with  --  ATRD22; RD22
42 Pectate  --  is product (in catalytic reaction) of  --  ATPME31; PME31  --  interacts with  --  EMB1968; RFC4
43 Pectate  --  is product (in catalytic reaction) of  --  ATPME31; PME31  --  interacts with  --  ATMEK4; ATMKK4; MKK4
44 Pectate  --  is product (in catalytic reaction) of  --  AT2G45220  --  has similar expression pattern (mutual information value=0.875605) with  --  AT5G40690
45 Pectate  --  is product (in catalytic reaction) of  --  ATPME2; PME2  --  has similar expression pattern (mutual information value=0.937395) with  --  AT3G59370
46 Pectate  --  is product (in catalytic reaction) of  --  ATPME2; PME2  --  has similar expression pattern (mutual information value=0.803125) with  --  NIC3
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