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Location:  Home > Details for node CRF4
Type: Protein GRN ID: np04072 Name: CRF4
Annotation: CRF4 | cytokinin response factor 4
Gene Locus: AT4G27950
Transcription factor /
transcriptional regulator:		 transcription factor family AP2-EREBP
References:
  • Cutcliffe JW, Hellmann E, Heyl A, Rashotte AM. CRFs form protein-protein interactions with each other and with members of the cytokinin signalling pathway in Arabidopsis via the CRF domain. J Exp Bot. 2011 Oct;62(14):4995-5002. doi: 10.1093/jxb/err199. Epub 2011 Jun 24. PubMed PMID: 21705390; PubMed Central PMCID: PMC3193008.
 
Pathways: Cytokinins 
Gene Expression (Affy ATH1 probeset):
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 CRF4  --  interacts with  --  AHP5
3 CRF4  --  interacts with  --  AHP4
4 CRF4  --  interacts with  --  AHP3
5 CRF4  --  interacts with  --  AHP2
6 CRF4  --  interacts with  --  AHP1
7 CRF4  --  interacts with  --  CRF7
8 CRF4  --  interacts with  --  CRF8
9 CRF4  --  interacts with  --  CRF6
10 CRF4  --  interacts with  --  CRF5
11 CRF4  --  interacts with  --  CRF3
12 CRF4  --  interacts with  --  CRF2
13 CRF4  --  interacts with  --  CRF1
14 CRF4  --  is a member of  --  CRF1 family74, transcription factor gene
15 CRF4  --  interacts with  --  AHP5  --  interacts with  --  ATUPS1; UPS1
16 CRF4  --  interacts with  --  AHP5  --  interacts with  --  AT3G02065
17 CRF4  --  interacts with  --  AHP5  --  interacts with  --  ARR1
18 CRF4  --  interacts with  --  AHP5  --  interacts with  --  ARR4
19 CRF4  --  interacts with  --  AHP5  --  interacts with  --  ATMYC2
20 CRF4  --  interacts with  --  AHP5  --  interacts with  --  AT4G14815
21 CRF4  --  interacts with  --  AHP5  --  interacts with  --  CKI1
22 CRF4  --  interacts with  --  AHP5  --  interacts with  --  AHK5; CKI2; HK5
23 CRF4  --  interacts with  --  AHP5  --  interacts with  --  ARR22
24 CRF4  --  interacts with  --  AHP5  --  is a member of  --  AHP1 family68, coding gene
25 CRF4  --  interacts with  --  AHP5  --  is a member of  --  AHP1 family66, coding gene
26 CRF4  --  interacts with  --  AHP3  --  interacts with  --  TCP10
27 CRF4  --  interacts with  --  AHP3  --  interacts with  --  ARR2
28 CRF4  --  interacts with  --  AHP3  --  interacts with  --  ARR9
29 CRF4  --  interacts with  --  AHP3  --  interacts with  --  ARR8
30 CRF4  --  interacts with  --  AHP3  --  interacts with  --  ARR7
31 CRF4  --  interacts with  --  AHP3  --  interacts with  --  ARR5
32 CRF4  --  interacts with  --  AHP3  --  interacts with  --  ARR3
33 CRF4  --  interacts with  --  AHP3  --  interacts with  --  AHK2
34 CRF4  --  interacts with  --  AHP2  --  interacts with  --  ATCNGC18; CNGC18
35 CRF4  --  interacts with  --  AHP2  --  interacts with  --  ABCG10
36 CRF4  --  interacts with  --  AHP2  --  interacts with  --  ATYSL3; YSL3
37 CRF4  --  interacts with  --  AHP2  --  interacts with  --  ATMND1
38 CRF4  --  interacts with  --  AHP2  --  interacts with  --  ARR10
39 CRF4  --  interacts with  --  AHP2  --  interacts with  --  AT5G03200
40 CRF4  --  interacts with  --  AHP2  --  interacts with  --  CKI1; CKL11
41 CRF4  --  interacts with  --  AHP2  --  interacts with  --  ETR1
42 CRF4  --  interacts with  --  AHP2  --  interacts with  --  ARR14
43 CRF4  --  interacts with  --  AHP2  --  interacts with  --  AHK4
44 CRF4  --  interacts with  --  AHP1  --  interacts with  --  ATELF5A-2; ELF5A-2; FBR12
45 CRF4  --  interacts with  --  AHP1  --  interacts with  --  AHK1; ATHK1; HK1
46 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.804269) with  --  AT2G38380
47 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.804269) with  --  AT2G38390
48 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.869634) with  --  ZIP3
49 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.87074) with  --  AT1G30870
50 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.802155) with  --  AT1G14960
51 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.885296) with  --  AtGH9C1; GH9C1
52 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.818454) with  --  ATEXT3; EXT3; RSH
53 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.903033) with  --  AT3G25930
54 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.869435) with  --  RHS13
55 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.844871) with  --  AT4G12545
56 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.844871) with  --  AIR1
57 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.871932) with  --  AT4G22212
58 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.853437) with  --  AT4G26010
59 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.846641) with  --  AT4G26220
60 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.856675) with  --  AT4G38080
61 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.832831) with  --  AT5G05500
62 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.908127) with  --  AT5G23840
63 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.876524) with  --  AT5G23830
64 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.952507) with  --  AT5G42510
65 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.952507) with  --  AT5G42500
66 CRF4  --  interacts with  --  AHP1  --  has similar expression pattern (mutual information value=0.953894) with  --  LCR74; PDF2.5
67 CRF4  --  interacts with  --  AHP1  --  is a member of  --  AHP1 family67, coding gene
68 CRF4  --  interacts with  --  AHP1  --  is modified by  --  MPK16
69 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.872017) with  --  ENR1; MOD1
70 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.848578) with  --  AT2G27480
71 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.859484) with  --  AT2G20410
72 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.998745) with  --  VHA-A
73 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.864908) with  --  AT1G09320
74 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.828648) with  --  WRKY4
75 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.801488) with  --  AT1G53520
76 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.813183) with  --  AT3G10020
77 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.809599) with  --  ASIL2
78 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.830308) with  --  AT4G02880
79 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.990684) with  --  ARI1; ATARI1
80 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.834486) with  --  XTH7
81 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.895249) with  --  AT5G01350
82 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.87304) with  --  AT5G04760
83 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=1.15645) with  --  AT5G08535
84 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.943285) with  --  DiT1
85 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.846832) with  --  AT5G62910
86 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.849593) with  --  AT5G24870
87 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=1.13595) with  --  SBP1
88 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.915965) with  --  AT1G25988
89 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.915965) with  --  AT1G25682
90 CRF4  --  interacts with  --  CRF7  --  has similar expression pattern (mutual information value=0.818632) with  --  ATE2FB; E2F1; E2FB
91 CRF4  --  interacts with  --  CRF6  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene
92 CRF4  --  interacts with  --  CRF6  --  interacts with  --  ATSWI3B?
93 CRF4  --  interacts with  --  CRF2  --  interacts with  --  ARR12
94 CRF4  --  interacts with  --  CRF2  --  is the target gene of  --  ath-miR5641
95 CRF4  --  interacts with  --  CRF1  --  interacts with  --  HY5
96 CRF4  --  is a member of  --  CRF1 family74, transcription factor gene  --  is a member of  --  CRF complex19
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