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Location:  Home > Details for node ARF4
Type: Protein GRN ID: np02069 Name: ARF4
Annotation: ARF4 | auxin response factor 4
Gene Locus: AT5G60450
Transcription factor /
transcriptional regulator:		 transcription factor family ARF
References:
  • Pekker I, Alvarez JP, Eshed Y. Auxin response factors mediate Arabidopsis organ asymmetry via modulation of KANADI activity. Plant Cell. 2005 Nov;17(11):2899-910. Epub 2005 Sep 30. PubMed PMID: 16199616; PubMed Central PMCID: PMC1276018.
 
Pathways: Auxins 
Gene Expression (Affy ATH1 probeset): 247643_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ARF4  --  interacts with  --  IAA34
3 ARF4  --  interacts with  --  IAA33
4 ARF4  --  interacts with  --  IAA32; MEE10
5 ARF4  --  interacts with  --  IAA31
6 ARF4  --  interacts with  --  IAA30
7 ARF4  --  interacts with  --  IAA29
8 ARF4  --  interacts with  --  IAA28
9 ARF4  --  interacts with  --  IAA27; PAP2
10 ARF4  --  interacts with  --  IAA26; PAP1
11 ARF4  --  interacts with  --  IAA20
12 ARF4  --  interacts with  --  IAA19
13 ARF4  --  interacts with  --  AXR3
14 ARF4  --  interacts with  --  IAA16
15 ARF4  --  interacts with  --  IAA15
16 ARF4  --  interacts with  --  IAA14
17 ARF4  --  interacts with  --  IAA13
18 ARF4  --  interacts with  --  BDL
19 ARF4  --  interacts with  --  IAA11
20 ARF4  --  interacts with  --  IAA10
21 ARF4  --  interacts with  --  IAA8
22 ARF4  --  interacts with  --  AXR2
23 ARF4  --  interacts with  --  ATAUX2-11; IAA4
24 ARF4  --  interacts with  --  IAA3
25 ARF4  --  interacts with  --  IAA2
26 ARF4  --  interacts with  --  ATAUX2-27; AUX2-27; IAA5
27 ARF4  --  interacts with  --  ARF18
28 ARF4  --  interacts with  --  ARF1
29 ARF4  --  interacts with  --  ARF12
30 ARF4  --  interacts with  --  ARF10
31 ARF4  --  interacts with  --  ARF9
32 ARF4  --  regulates the expression of   --  ZFP6
33 ARF4  --  regulates the expression of   --  LBD18
34 ARF4  --  regulates the expression of   --  ATZFP2; ZFP2
35 ARF4  --  regulates the expression of   --  AT1G29440
36 ARF4  --  regulates the expression of   --  ARF1; ATARF; ATARF1; ATARFA1A
37 ARF4  --  regulates the expression of   --  ath-miR390a
38 ARF4  --  is regulated by  --  ARF7
39 ARF4  --  is regulated by  --  AXR5
40 ARF4  --  is regulated by  --  ARF6
41 ARF4  --  is regulated by  --  ARF5
42 ARF4  --  is regulated by  --  IAA9
43 ARF4  --  is regulated by  --  IAA6; SHY1
44 ARF4  --  is regulated by  --  IAA18
45 ARF4  --  is the target gene of  --  TAS1A
46 ARF4  --  is the target gene of  --  ATTAS3; TAS3; TASIR-ARF
47 ARF4  --  is the target gene of  --  TASIR-ARF
48 ARF4  --  is the target gene of  --  TAS3b
49 ARF4  --  is a member of  --  ARF1 family35, transcription factor gene
50 ARF4  --  interacts with  --  IAA33  --  interacts with  --  ARF16
51 ARF4  --  interacts with  --  IAA31  --  interacts with  --  AFB2
52 ARF4  --  interacts with  --  IAA30  --  interacts with  --  AtMYB51; BW51A; BW51B; HIG1; MYB51
53 ARF4  --  interacts with  --  IAA29  --  interacts with  --  ATWRKY57; WRKY57
54 ARF4  --  interacts with  --  IAA29  --  interacts with  --  AFB1
55 ARF4  --  interacts with  --  IAA28  --  interacts with  --  AFB5
56 ARF4  --  interacts with  --  IAA19  --  interacts with  --  IMPA-2
57 ARF4  --  interacts with  --  IAA19  --  interacts with  --  ATIMPALPHA3; IMPA-3; MOS6
58 ARF4  --  interacts with  --  IAA19  --  interacts with  --  TPR4; WSIP2
59 ARF4  --  interacts with  --  AXR3  --  has similar expression pattern (mutual information value=1.14712) with  --  ACLA-2
60 ARF4  --  interacts with  --  AXR3  --  has similar expression pattern (mutual information value=0.905943) with  --  AT1G65010
61 ARF4  --  interacts with  --  AXR3  --  has similar expression pattern (mutual information value=1.07723) with  --  BGAL5
62 ARF4  --  interacts with  --  AXR3  --  has similar expression pattern (mutual information value=0.857614) with  --  CAT1
63 ARF4  --  interacts with  --  AXR3  --  has similar expression pattern (mutual information value=0.953225) with  --  AT3G18200
64 ARF4  --  interacts with  --  AXR3  --  has similar expression pattern (mutual information value=0.817793) with  --  AT3G57810
65 ARF4  --  interacts with  --  AXR3  --  has similar expression pattern (mutual information value=1.00628) with  --  AT5G39320
66 ARF4  --  interacts with  --  IAA14  --  is regulated by  --  HY5
67 ARF4  --  interacts with  --  BDL  --  interacts with  --  AFB3
68 ARF4  --  interacts with  --  IAA11  --  interacts with  --  VPS9B
69 ARF4  --  interacts with  --  IAA11  --  interacts with  --  ATSPX1; SPX1
70 ARF4  --  interacts with  --  IAA11  --  interacts with  --  AT5G65130
71 ARF4  --  interacts with  --  IAA11  --  interacts with  --  AT5G65683
72 ARF4  --  interacts with  --  IAA11  --  interacts with  --  ATCIPK14; ATSR1; CIPK14; PKS24; SnRK3.15; SR1
73 ARF4  --  interacts with  --  IAA11  --  interacts with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
74 ARF4  --  interacts with  --  IAA11  --  interacts with  --  AT5G52547
75 ARF4  --  interacts with  --  IAA11  --  interacts with  --  AT5G02870
76 ARF4  --  interacts with  --  IAA11  --  interacts with  --  ATP8; AtRCD1; CEO; CEO1; RCD1
77 ARF4  --  interacts with  --  IAA11  --  interacts with  --  AT3G01300
78 ARF4  --  interacts with  --  IAA11  --  interacts with  --  AT3G19120
79 ARF4  --  interacts with  --  IAA11  --  interacts with  --  ATMBD8; MBD8
80 ARF4  --  interacts with  --  IAA11  --  interacts with  --  AT3G05640
81 ARF4  --  interacts with  --  IAA11  --  interacts with  --  DRIP2
82 ARF4  --  interacts with  --  IAA11  --  interacts with  --  AT2G02410
83 ARF4  --  interacts with  --  IAA11  --  interacts with  --  CIPK22; SnRK3.19
84 ARF4  --  interacts with  --  IAA11  --  interacts with  --  CIPK9; PKS6; SnRK3.12
85 ARF4  --  interacts with  --  IAA11  --  interacts with  --  AT2G33450
86 ARF4  --  interacts with  --  IAA11  --  interacts with  --  AT3G23390
87 ARF4  --  interacts with  --  IAA10  --  interacts with  --  ATMBD2; MBD02; MBD2
88 ARF4  --  interacts with  --  IAA10  --  interacts with  --  AtHB32; HB32; ZHD14
89 ARF4  --  interacts with  --  IAA8  --  regulates the expression of   --  AtTPR2; TPR2
90 ARF4  --  interacts with  --  IAA8  --  interacts with  --  ARF15
91 ARF4  --  interacts with  --  AXR2  --  interacts with  --  ATCUL1
92 ARF4  --  interacts with  --  AXR2  --  interacts with  --  TIR
93 ARF4  --  interacts with  --  AXR2  --  has similar expression pattern (mutual information value=0.888679) with  --  PKS2
94 ARF4  --  interacts with  --  IAA3  --  regulates the expression of   --  ATIPT5
95 ARF4  --  interacts with  --  IAA3  --  regulates the expression of   --  ATPIN1 family27, coding gene
96 ARF4  --  interacts with  --  IAA3  --  regulates the expression of   --  ATIPT1 family54, coding gene
97 ARF4  --  interacts with  --  IAA3  --  is regulated by  --  ARR12
98 ARF4  --  interacts with  --  IAA3  --  is regulated by  --  ARR1
99 ARF4  --  interacts with  --  IAA3  --  interacts with  --  ATGRX2; CXIP2
100 ARF4  --  interacts with  --  IAA3  --  interacts with  --  ATGRX4; GRX4
101 ARF4  --  interacts with  --  IAA3  --  interacts with  --  AT1G09500
102 ARF4  --  interacts with  --  IAA3  --  interacts with  --  Phytochrome B (PhyB)
103 ARF4  --  interacts with  --  IAA3  --  has similar expression pattern (mutual information value=0.810977) with  --  AT4G09890
104 ARF4  --  interacts with  --  IAA2  --  interacts with  --  MBD1
105 ARF4  --  interacts with  --  IAA2  --  interacts with  --  YUC6
106 ARF4  --  interacts with  --  ARF18  --  interacts with  --  CHR3; SYD
107 ARF4  --  interacts with  --  ARF1  --  interacts with  --  GC3; GDAP1
108 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.930988) with  --  AT2G02570
109 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.827338) with  --  AT2G18820
110 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.86138) with  --  AT2G07070
111 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.942357) with  --  AT2G29370
112 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.817501) with  --  ATCDC5; ATMYBCDC5; CDC5
113 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.817126) with  --  ATCUL3; ATCUL3A; CUL3; CUL3A
114 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.81451) with  --  AT2G24830
115 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.887161) with  --  DRP3B
116 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.825308) with  --  AT1G16270
117 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.825308) with  --  AT1G79570
118 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.808922) with  --  AT1G02890
119 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.887062) with  --  ARI5; ATARI5
120 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.814712) with  --  ABCG13
121 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.81105) with  --  AT1G18950
122 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.809465) with  --  AT3G17160
123 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.814716) with  --  AT4G13160
124 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.86187) with  --  AT5G42765
125 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.980445) with  --  AT5G47130
126 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.800821) with  --  AT5G54220
127 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.880696) with  --  AT5G55670
128 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.884412) with  --  AtTic20-V; Tic20-V
129 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.847407) with  --  AT5G65240
130 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.838491) with  --  SKIP2; VFB4
131 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.85167) with  --  ELF9
132 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.876625) with  --  AT5G17440
133 ARF4  --  interacts with  --  ARF12  --  has similar expression pattern (mutual information value=0.89111) with  --  ATRCY1; RCY1
134 ARF4  --  interacts with  --  ARF10  --  is the target gene of  --  ath-miR160c
135 ARF4  --  interacts with  --  ARF10  --  is the target gene of  --  ath-miR160b
136 ARF4  --  interacts with  --  ARF10  --  is the target gene of  --  ath-miR160a
137 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.915414) with  --  LAC3
138 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.811694) with  --  AT1G09740
139 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.913487) with  --  PGSIP5
140 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.908106) with  --  RCI3; RCI3A
141 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.938066) with  --  AT2G04800
142 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.94996) with  --  CASP1
143 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.961728) with  --  AT1G30750
144 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.913152) with  --  AR411; ATWRKY14; WRKY14
145 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=1.04117) with  --  AT3G01190
146 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=1.0011) with  --  scpl1
147 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=1.0011) with  --  scpl2
148 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.812666) with  --  AT5G47950
149 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.895156) with  --  AGP22; ATAGP22
150 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=1.10644) with  --  ATFLS5; FLS5
151 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.918815) with  --  AT5G66390
152 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.897151) with  --  AtPLAIVB; PLA IVB; PLP5
153 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.897151) with  --  AtPLAIVA; PLA IVA; PLP1
154 ARF4  --  regulates the expression of   --  ZFP6  --  has similar expression pattern (mutual information value=0.831374) with  --  04C11; ATPEN1; PEN1
155 ARF4  --  regulates the expression of   --  ZFP6  --  is regulated by  --  ARF14
156 ARF4  --  regulates the expression of   --  ZFP6  --  is regulated by  --  ARF2/ARF1-BP
157 ARF4  --  regulates the expression of   --  ZFP6  --  is regulated by  --  ARF11
158 ARF4  --  regulates the expression of   --  ZFP6  --  is regulated by  --  ARF13
159 ARF4  --  regulates the expression of   --  LBD18  --  interacts with  --  ASL18; LBD16
160 ARF4  --  regulates the expression of   --  LBD18  --  interacts with  --  GIP1
161 ARF4  --  regulates the expression of   --  AT1G29440  --  has similar expression pattern (mutual information value=1.24032) with  --  AT1G29430
162 ARF4  --  regulates the expression of   --  AT1G29440  --  has similar expression pattern (mutual information value=1.24032) with  --  AT5G27780
163 ARF4  --  regulates the expression of   --  AT1G29440  --  has similar expression pattern (mutual information value=1.17539) with  --  SAUR68
164 ARF4  --  regulates the expression of   --  AT1G29440  --  has similar expression pattern (mutual information value=0.895614) with  --  AT5G18060
165 ARF4  --  regulates the expression of   --  ath-miR390a  --  inhibit the expression of  --  AT5G03640
166 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  ATWRKY23; WRKY23
167 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  ATCKX5
168 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT4G12510
169 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT4G17350
170 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  BRL3
171 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  GH3.5
172 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT5G02760
173 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT3G50340
174 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  GATA23
175 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  AT1G78110
176 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  ATPIN1
177 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  GH3.2 ykd1/AUR3/bru6/gxh3-2
178 ARF4  --  is regulated by  --  ARF7  --  regulates the expression of   --  ASL16; LBD29
179 ARF4  --  is regulated by  --  ARF7  --  interacts with  --  RPL24; RPL24B; STV1
180 ARF4  --  is regulated by  --  ARF7  --  interacts with  --  ATL5; OLI5; PGY3; RPL5A
181 ARF4  --  is regulated by  --  ARF7  --  interacts with  --  RGA1
182 ARF4  --  is regulated by  --  ARF7  --  interacts with  --  ARF20
183 ARF4  --  is regulated by  --  AXR5  --  interacts with  --  ARF17
184 ARF4  --  is regulated by  --  AXR5  --  interacts with  --  TIR1
185 ARF4  --  is regulated by  --  AXR5  --  interacts with  --  ARF8
186 ARF4  --  is regulated by  --  AXR5  --  interacts with  --  UGT74D1
187 ARF4  --  is regulated by  --  AXR5  --  interacts with  --  GLP4
188 ARF4  --  is regulated by  --  AXR5  --  interacts with  --  AT3G18140
189 ARF4  --  is regulated by  --  AXR5  --  interacts with  --  TPR3
190 ARF4  --  is regulated by  --  AXR5  --  interacts with  --  TPR2
191 ARF4  --  is regulated by  --  AXR5  --  interacts with  --  TPR1
192 ARF4  --  is regulated by  --  AXR5  --  is a member of  --  family38, transcription factor interactor and regulator gene
193 ARF4  --  is regulated by  --  AXR5  --  is a member of  --  IAA3 family34, transcription factor interactor and regulator gene
194 ARF4  --  is regulated by  --  AXR5  --  is modified by  --  MPK16
195 ARF4  --  is regulated by  --  ARF6  --  regulates the expression of   --  MIR167A;MIR167B, miRNA or ta-siRNA
196 ARF4  --  is regulated by  --  ARF6  --  regulates the expression of   --  ATMLO12
197 ARF4  --  is regulated by  --  ARF6  --  interacts with  --  AT2G18300
198 ARF4  --  is regulated by  --  ARF6  --  interacts with  --  BEE2
199 ARF4  --  is regulated by  --  ARF6  --  interacts with  --  PIF4
200 ARF4  --  is regulated by  --  ARF6  --  is the target gene of  --  ath-miR167c
201 ARF4  --  is regulated by  --  ARF5  --  regulates the expression of   --  BES1
202 ARF4  --  is regulated by  --  ARF5  --  regulates the expression of   --  ARR7
203 ARF4  --  is regulated by  --  ARF5  --  regulates the expression of   --  ARR15
204 ARF4  --  is regulated by  --  ARF5  --  interacts with  --  BRX
205 ARF4  --  is regulated by  --  IAA9  --  interacts with  --  ARF22
206 ARF4  --  is regulated by  --  IAA18  --  interacts with  --  ATEXO70H1; EXO70H1
207 ARF4  --  is regulated by  --  IAA18  --  interacts with  --  AT5G55220
208 ARF4  --  is regulated by  --  IAA18  --  interacts with  --  AtPPR2; EMB2750; PPR2
209 ARF4  --  is the target gene of  --  TAS1A  --  inhibit the expression of  --  AT4G29770
210 ARF4  --  is the target gene of  --  TAS1A  --  inhibit the expression of  --  AT4G29760
211 ARF4  --  is the target gene of  --  TAS1A  --  inhibit the expression of  --  AT1G51670
212 ARF4  --  is the target gene of  --  TAS1A  --  inhibit the expression of  --  AT5G18040
213 ARF4  --  is the target gene of  --  TAS1A  --  is the target gene of  --  ath-miR5636
214 ARF4  --  is the target gene of  --  TAS1A  --  is the target gene of  --  ath-miR173-5p
215 ARF4  --  is the target gene of  --  ATTAS3; TAS3; TASIR-ARF  --  is the target gene of  --  ath-miR390b
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