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Location:  Home > Details for node AT3G48430
Type: Protein GRN ID: np01061 Name: AT3G48430
Annotation: REF6 | relative of early flowering 6
Gene Locus: AT3G48430
Transcription factor /
transcriptional regulator:		 transcription factor & chromatin remodeling family JUMONJI
References:
  • Yu X, Li L, Li L, Guo M, Chory J, Yin Y. Modulation of brassinosteroid-regulated gene expression by Jumonji domain-containing proteins ELF6 and REF6 in Arabidopsis. Proc Natl Acad Sci U S A. 2008 May 27;105(21):7618-23. doi: 10.1073/pnas.0802254105. Epub 2008 May 8. PubMed PMID: 18467490; PubMed Central PMCID: PMC2396691.
 
Pathways: Brassinosteroids 
Gene Expression (Affy ATH1 probeset):
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G48430  --  regulates the expression of   --  FLC
3 AT3G48430  --  regulates the expression of   --  BES1
4 AT3G48430  --  regulates the expression of   --  FLC  --  interacts with  --  PFT1
5 AT3G48430  --  regulates the expression of   --  FLC  --  interacts with  --  AGL22; SVP
6 AT3G48430  --  regulates the expression of   --  FLC  --  interacts with  --  ATSIZ1
7 AT3G48430  --  regulates the expression of   --  FLC  --  interacts with  --  AGL16
8 AT3G48430  --  regulates the expression of   --  FLC  --  regulates the expression of   --  SOC1
9 AT3G48430  --  regulates the expression of   --  FLC  --  is regulated by  --  ABI5
10 AT3G48430  --  regulates the expression of   --  FLC  --  is regulated by  --  CBFS
11 AT3G48430  --  regulates the expression of   --  FLC  --  is regulated by  --  ATMYB67; ATY53; MYB67; MYB67
12 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  ATGLK2; GLK2; GPRI2
13 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  ATGLK1; GLK1; GPRI1
14 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  BPG2
15 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  ATMYB30
16 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  ARF5
17 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  GL2
18 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  ATMYB66; MYB66; WER; WER1
19 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  CYC2; CYCB1;3
20 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  CYCB1;4
21 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  CYC3; CYCB1;5
22 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  CYC1; CYCB1; CYCB1;1
23 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  CYCD3; CYCD3;1
24 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  PIF7
25 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  PIF6; PIL2
26 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  PIF5; PIL6
27 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  PIF4
28 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  PIF3
29 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  PIFI
30 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  della family, transcription factor gene
31 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  ARF1 family35, transcription factor gene
32 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  BIM1
33 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  AT5G04240
34 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  HERK1/THE1 family13, coding gene
35 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  ATSAUR15; SAUR-AC1; SAUR15; SAUR_AC1
36 AT3G48430  --  regulates the expression of   --  BES1  --  regulates the expression of   --  FAR2; MS2
37 AT3G48430  --  regulates the expression of   --  BES1  --  interacts with  --  AtHsp90.2; ERD8; HSP81-2; HSP90.2
38 AT3G48430  --  regulates the expression of   --  BES1  --  interacts with  --  HAT1
39 AT3G48430  --  regulates the expression of   --  BES1  --  interacts with  --  AtIWS1
40 AT3G48430  --  regulates the expression of   --  BES1  --  interacts with  --  ASHH2; CCR1; EFS; LAZ2; SDG8
41 AT3G48430  --  regulates the expression of   --  BES1  --  interacts with  --  MAX2; ORE9; PPS
42 AT3G48430  --  regulates the expression of   --  BES1  --  interacts with  --  ATB' BETA
43 AT3G48430  --  regulates the expression of   --  BES1  --  interacts with  --  ATB' ALPHA
44 AT3G48430  --  regulates the expression of   --  BES1  --  interacts with  --  ATMYBL2; MYBL2
45 AT3G48430  --  regulates the expression of   --  BES1  --  interacts with  --  BIM3
46 AT3G48430  --  regulates the expression of   --  BES1  --  interacts with  --  BIM2
47 AT3G48430  --  regulates the expression of   --  BES1  --  is a member of  --  BZR1 family6, transcription factor gene
48 AT3G48430  --  regulates the expression of   --  BES1  --  is a member of  --  BES1 family7, transcription factor gene
49 AT3G48430  --  regulates the expression of   --  BES1  --  is a member of  --  bri1 complex7
50 AT3G48430  --  regulates the expression of   --  BES1  --  is modified by  --  ASKTHETA; ATSK32; SK32
51 AT3G48430  --  regulates the expression of   --  BES1  --  is modified by  --  ASKdZeta
52 AT3G48430  --  regulates the expression of   --  BES1  --  is modified by  --  ATGSK1; ATSK2-3; ATSK22; BIL2; GSK1; SK22
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