Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ath-miR5995b
Type: non-coding-miRNA GRN ID: nn06356 Name: ath-miR5995b
Annotation:
miRBase: Link
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR5995b  --  inhibit the expression of  --  AtMES9
3 ath-miR5995b  --  inhibit the expression of  --  ATCAP1; CAP 1; CAP1
4 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3
5 ath-miR5995b  --  inhibit the expression of  --  ATMES3; MES3
6 ath-miR5995b  --  inhibit the expression of  --  ABE4; ATMES4; MES4
7 ath-miR5995b  --  inhibit the expression of  --  ATMES19; MES19
8 ath-miR5995b  --  inhibit the expression of  --  AtMES7
9 ath-miR5995b  --  inhibit the expression of  --  ABE1; ATMES6; MES6
10 ath-miR5995b  --  inhibit the expression of  --  LQY1
11 ath-miR5995b  --  inhibit the expression of  --  AtMES9  --  interacts with  --  AtHNL; ATMES5; HNL; MES5
12 ath-miR5995b  --  inhibit the expression of  --  AtMES9  --  interacts with  --  ATMES10; MES10
13 ath-miR5995b  --  inhibit the expression of  --  AtMES9  --  interacts with  --  AtMES2
14 ath-miR5995b  --  inhibit the expression of  --  AtMES9  --  has product (in catalytic reaction)  --  Methanol
15 ath-miR5995b  --  inhibit the expression of  --  AtMES9  --  has product (in catalytic reaction)  --  16-Epivellosimine
16 ath-miR5995b  --  inhibit the expression of  --  AtMES9  --  is a member of  --  AtMES1 family113, coding gene
17 ath-miR5995b  --  inhibit the expression of  --  AtMES9  --  is the target gene of  --  ath-miR5595a
18 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=0.832761) with  --  AT2G38380
19 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=0.832761) with  --  AT2G38390
20 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=1.1447) with  --  AT1G05240
21 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=1.1447) with  --  AT1G05250
22 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=1.00561) with  --  AT5G06630
23 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=1.00561) with  --  AT2G24980
24 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=1.17682) with  --  AT4G26010
25 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=0.877623) with  --  AT4G30670
26 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=1.24463) with  --  AGP3
27 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=1.34553) with  --  AT5G05500
28 ath-miR5995b  --  inhibit the expression of  --  ATPRP3; PRP3  --  has similar expression pattern (mutual information value=1.10741) with  --  AT5G35190
29 ath-miR5995b  --  inhibit the expression of  --  ATMES3; MES3  --  has similar expression pattern (mutual information value=0.862004) with  --  CYP83A1; REF2
30 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  interacts with  --  AT1G67700
31 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  interacts with  --  AT4G28020
32 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.37997) with  --  PSBW
33 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.41869) with  --  CRR3
34 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.15999) with  --  AT2G29310
35 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.41258) with  --  PSBX
36 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.48085) with  --  ZKT
37 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.9253) with  --  TLP18.3
38 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.29095) with  --  AT2G03750
39 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.52342) with  --  CRB; CSP41B; HIP1.3
40 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.58115) with  --  AT2G05310
41 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.58115) with  --  AT4G13500
42 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.40404) with  --  AT1G54500
43 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.40644) with  --  OE23; OEE2; PSBP-1; PSII-P
44 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.63814) with  --  AT1G74730
45 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=0.892391) with  --  AT1G56145
46 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.53165) with  --  NDF1; NDH48
47 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.2815) with  --  ATCDSP32; CDSP32
48 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.06541) with  --  AT1G49750
49 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.41101) with  --  AT1G14345
50 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.48076) with  --  AT1G75460
51 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.6357) with  --  AT1G21500
52 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.53212) with  --  AT1G76450
53 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.35427) with  --  AT1G52220
54 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.41212) with  --  ATFD2; FED A
55 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.57612) with  --  TAPX
56 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.24482) with  --  NDF5
57 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.43768) with  --  ATCYP38; CYP38
58 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.28764) with  --  ATPPT2; PPT2
59 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.61117) with  --  AT3G10060
60 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.67024) with  --  ATF1; TRXF1
61 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.38185) with  --  ATHM4; ATM4; TRX-M4
62 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.75507) with  --  PSAH-1
63 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.95692) with  --  PSBTN
64 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.29492) with  --  AT1G20810
65 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.35113) with  --  AT1G18060
66 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.47918) with  --  LHCA2*1; LHCA6
67 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.44328) with  --  DRT112; PETE2
68 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.40248) with  --  PRK
69 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.67832) with  --  AT4G02530
70 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.09295) with  --  AOP2
71 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.57345) with  --  PETC; PGR1
72 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.46749) with  --  APX4; TL29
73 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.80727) with  --  PSBQ; PSBQ-1; PSBQA
74 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.71413) with  --  AT4G27700
75 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.50448) with  --  PSAE-1
76 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.37727) with  --  SHM1; SHMT1; STM
77 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.40295) with  --  FBA2
78 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.52494) with  --  AT3G50685
79 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.64722) with  --  OEC33; PSBO-2; PSBO2
80 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.67647) with  --  HCEF1
81 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.63134) with  --  PPL1
82 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.53497) with  --  AT3G56650
83 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.27901) with  --  OHP; PDE335
84 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.49891) with  --  AT5G07020
85 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.16914) with  --  ATMYB29; MYB29; PMG2
86 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.57201) with  --  HCF136
87 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.47334) with  --  ATPGLP1; PGLP1
88 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.47334) with  --  AT5G36790
89 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.29086) with  --  AT5G37360
90 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.51637) with  --  AT5G38520
91 ath-miR5995b  --  inhibit the expression of  --  LQY1  --  has similar expression pattern (mutual information value=1.63761) with  --  AT5G52970
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab