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Location:  Home > Details for node ath-miR5654-3p
Type: non-coding-miRNA GRN ID: nn06354 Name: ath-miR5654-3p
Annotation: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Gene Locus: AT1G32583
miRBase: Link
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR5654-3p  --  inhibit the expression of  --  AT5G60060
3 ath-miR5654-3p  --  inhibit the expression of  --  AT5G55660
4 ath-miR5654-3p  --  inhibit the expression of  --  DAU1
5 ath-miR5654-3p  --  inhibit the expression of  --  ATISU1; ISU1
6 ath-miR5654-3p  --  inhibit the expression of  --  RBK2
7 ath-miR5654-3p  --  inhibit the expression of  --  AT2G39725
8 ath-miR5654-3p  --  inhibit the expression of  --  SS3
9 ath-miR5654-3p  --  inhibit the expression of  --  AT5G55660  --  has similar expression pattern (mutual information value=0.856027) with  --  AT1G80790
10 ath-miR5654-3p  --  inhibit the expression of  --  ATISU1; ISU1  --  interacts with  --  AT5G06410
11 ath-miR5654-3p  --  inhibit the expression of  --  ATISU1; ISU1  --  interacts with  --  AT4G35110
12 ath-miR5654-3p  --  inhibit the expression of  --  ATISU1; ISU1  --  interacts with  --  AT4G25680
13 ath-miR5654-3p  --  inhibit the expression of  --  ATISU1; ISU1  --  interacts with  --  AT4G25660
14 ath-miR5654-3p  --  inhibit the expression of  --  ATISU1; ISU1  --  interacts with  --  SCL3
15 ath-miR5654-3p  --  inhibit the expression of  --  RBK2  --  interacts with  --  AT2G23780
16 ath-miR5654-3p  --  inhibit the expression of  --  RBK2  --  modify  --  NCRK
17 ath-miR5654-3p  --  inhibit the expression of  --  AT2G39725  --  interacts with  --  AZF3; ZF3
18 ath-miR5654-3p  --  inhibit the expression of  --  SS3  --  has product (in catalytic reaction)  --  Secologanin
19 ath-miR5654-3p  --  inhibit the expression of  --  SS3  --  has product (in catalytic reaction)  --  TAM
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