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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node Indole
Type: Compound GRN ID: nc02003 Name: Indole
Annotation: 2,3-Benzopyrrole
KEGG Acc.: C00463
CHEBI ID:
Formula: C8H7N
M.W.: 117.1479
Pathways: Auxins 
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate
3 Indole  --  has product (in catalytic reaction)  --  L-Trp
4 Indole  --  is product (in catalytic reaction) of  --  TSB1
5 Indole  --  is product (in catalytic reaction) of  --  IGP
6 Indole  --  is product (in catalytic reaction) of  --  TSBtype2
7 Indole  --  is product (in catalytic reaction) of  --  AT5G28237
8 Indole  --  is product (in catalytic reaction) of  --  TSB2
9 Indole  --  is product (in catalytic reaction) of  --  AT4G02610
10 Indole  --  is product (in catalytic reaction) of  --  TSA1
11 Indole  --  is transported by  --  AT1G04420
12 Indole  --  is transported by  --  AT1G03550
13 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  has product (in catalytic reaction)  --  Glycerone phosphate
14 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  has product (in catalytic reaction)  --  1-Deoxy-D-xylulose 5-phosphate
15 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  has product (in catalytic reaction)  --  D-Fructose 6-phosphate
16 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  has product (in catalytic reaction)  --  D-Erythrose 4-phosphate
17 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  has product (in catalytic reaction)  --  D-Xylulose 5-phosphate
18 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  has product (in catalytic reaction)  --  D-Ribose 5-phosphate
19 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  has product (in catalytic reaction)  --  3-Phospho-D-glyceroyl phosphate
20 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  has product (in catalytic reaction)  --  3-Phospho-D-glycerate
21 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is product (in catalytic reaction) of  --  AT5G03690
22 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is product (in catalytic reaction) of  --  D-Fructose 1,6-bisphosphate
23 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is product (in catalytic reaction) of  --  FBA2
24 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is product (in catalytic reaction) of  --  AT4G26530
25 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is product (in catalytic reaction) of  --  AT4G26520
26 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is product (in catalytic reaction) of  --  AT3G52930
27 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is product (in catalytic reaction) of  --  AT2G36460
28 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is product (in catalytic reaction) of  --  FBA1
29 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is product (in catalytic reaction) of  --  PDE345
30 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is transported by  --  ABCB5; PGP5
31 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is transported by  --  ABCB3; MDR3; PGP3
32 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is transported by  --  ATTIP1.3; GAMMA-TIP3; TIP1;3
33 Indole  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate  --  is transported by  --  AT4G01450
34 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  has product (in catalytic reaction)  --  IAOx
35 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  has product (in catalytic reaction)  --  IAM
36 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  has product (in catalytic reaction)  --  TAM
37 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  has product (in catalytic reaction)  --  IPyA
38 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  has product (in catalytic reaction)  --  N,N-Dihydroxy-L-tryptophan
39 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  has product (in catalytic reaction)  --  N-Hydroxy-L-tryptophan
40 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  has product (in catalytic reaction)  --  Indole-3-acetaldehyde oxime
41 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  COX1
42 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD2; NAD2.2; NAD2B
43 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  ORF291
44 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD1; NAD1A; ND1
45 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD1; NAD1B
46 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD3
47 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD4L
48 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD4
49 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD1; NAD1C
50 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD5; NAD5.1; NAD5A
51 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD7
52 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD2; NAD2.1; NAD2A
53 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  NAD6
54 Indole  --  has product (in catalytic reaction)  --  L-Trp  --  is transported by  --  COB
55 Indole  --  is product (in catalytic reaction) of  --  TSB1  --  interacts with  --  TRFL5
56 Indole  --  is product (in catalytic reaction) of  --  IGP  --  is product (in catalytic reaction) of  --  AT5G48220
57 Indole  --  is product (in catalytic reaction) of  --  IGP  --  is product (in catalytic reaction) of  --  1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate
58 Indole  --  is product (in catalytic reaction) of  --  IGP  --  is product (in catalytic reaction) of  --  (IGPS)
59 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=0.931191) with  --  ATSIG6; SIG6; SIGF; SOLDAT8
60 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=1.14827) with  --  LPA3
61 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=0.992036) with  --  LPA1
62 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=1.07822) with  --  AT1G50450
63 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=1.13128) with  --  AT3G08920
64 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=1.10349) with  --  AT3G04550
65 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=1.00963) with  --  PLSP1
66 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=1.0787) with  --  PGR7
67 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=1.21726) with  --  AT3G25805
68 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=1.19541) with  --  AT1G18170
69 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=0.941317) with  --  PGR3
70 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=0.913487) with  --  AT4G37510
71 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=1.00096) with  --  AT4G39040
72 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=1.17331) with  --  AT5G28750
73 Indole  --  is transported by  --  AT1G04420  --  has similar expression pattern (mutual information value=0.82923) with  --  CYP97B3
74 Indole  --  is transported by  --  AT1G04420  --  transport  --  4-Aminobutanoate
75 Indole  --  is transported by  --  AT1G04420  --  transport  --  Tyrosine
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