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Location:  Home > Details for node ykd1 family22, transcription factor gene
Type: Family GRN ID: gf02004 Name: ykd1 family22, transcription factor gene
Annotation: transcription factor gene family, members include GH3.2 ykd1/AUR3/bru6/gxh3-2, GH3.17, GH3.3, GH3.4, GH3.5, PUCHI, GH3.1, GH3.9
Pathways: Auxins 
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ykd1 family22, transcription factor gene  --  has family member  --  GH3.9
3 ykd1 family22, transcription factor gene  --  has family member  --  GH3.1
4 ykd1 family22, transcription factor gene  --  has family member  --  PUCHI
5 ykd1 family22, transcription factor gene  --  has family member  --  GH3.5
6 ykd1 family22, transcription factor gene  --  has family member  --  GH3.4
7 ykd1 family22, transcription factor gene  --  has family member  --  GH3.3
8 ykd1 family22, transcription factor gene  --  has family member  --  GH3.17
9 ykd1 family22, transcription factor gene  --  has family member  --  GH3.2 ykd1/AUR3/bru6/gxh3-2
10 ykd1 family22, transcription factor gene  --  has family member  --  GH3.9  --  interacts with  --  AT1G14340
11 ykd1 family22, transcription factor gene  --  has family member  --  PUCHI  --  is the target gene of  --  ath-miR829.2
12 ykd1 family22, transcription factor gene  --  has family member  --  GH3.5  --  is regulated by  --  ARF7
13 ykd1 family22, transcription factor gene  --  has family member  --  GH3.17  --  has similar expression pattern (mutual information value=0.965422) with  --  AT2G43610
14 ykd1 family22, transcription factor gene  --  has family member  --  GH3.17  --  has similar expression pattern (mutual information value=1.03767) with  --  ATWRKY9; WRKY9
15 ykd1 family22, transcription factor gene  --  has family member  --  GH3.17  --  has similar expression pattern (mutual information value=0.821416) with  --  CYP706A7
16 ykd1 family22, transcription factor gene  --  has family member  --  GH3.17  --  has similar expression pattern (mutual information value=0.808893) with  --  AT5G06930
17 ykd1 family22, transcription factor gene  --  has family member  --  GH3.17  --  has similar expression pattern (mutual information value=0.891269) with  --  ACAT2; EMB1276
18 ykd1 family22, transcription factor gene  --  has family member  --  GH3.2 ykd1/AUR3/bru6/gxh3-2  --  modify  --  CENH3; HTR12
19 ykd1 family22, transcription factor gene  --  has family member  --  GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  MYB77
20 ykd1 family22, transcription factor gene  --  has family member  --  GH3.2 ykd1/AUR3/bru6/gxh3-2  --  is regulated by  --  ARF17
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