LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

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Gene Expression Profiling of Populus trichocarpa to Study Xylem Cells and Different Tissues

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Condition List

Name Experiment Genotype Mutation Stage Tissue/organ Treatment Level Time Selected Samples
CombinationXylemfiberVesselRaycells RNA-seq of major tissues ...... 6 months Xylem Combination of xylem fiber, vessel and ray cells
  • CombinationXylemfiberVesselRaycells-1
  • CombinationXylemfiberVesselRaycells-2
  • CombinationXylemfiberVesselRaycells-3
Leaf RNA-seq of major tissues ...... 6 months Leaf Leaf
  • Leaf-1
  • Leaf-2
  • Leaf-3
Phloem RNA-seq of major tissues ...... 6 months Phloem Phloem
  • Phloem-1
  • Phloem-2
  • Phloem-3
PrimaryRoot RNA-seq of major tissues ...... 6 months Primary root Primary root
  • PrimaryRoot-1
  • PrimaryRoot-2
  • PrimaryRoot-3
ShootTip RNA-seq of major tissues ...... 6 months Shoot tip Shoot tip
  • ShootTip-1
  • ShootTip-2
  • ShootTip-3
StemDifferentiatingXylem RNA-seq of major tissues ...... 6 months Stem differentiating xylem Stem differentiating xylem
  • StemDifferentiatingXylem-1
  • StemDifferentiatingXylem-2
  • StemDifferentiatingXylem-3
XylemFiberCells RNA-seq of major tissues ...... 6 months Xylem Xylem fiber cells
  • XylemFiberCells-1
  • XylemFiberCells-2
  • XylemFiberCells-3
XylemVesselCells RNA-seq of major tissues ...... 6 months Xylem Xylem vessel cells
  • XylemVesselCells-1
  • XylemVesselCells-2
  • XylemVesselCells-3