GMEF: Genotype Maker Extraction and Filtering
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Analysis
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Location:
Analysis
Step 1.
Select one of our Hosting Hapmap Genetic Variant File(.bcf)
Medicago_Hapmap_complete-set-2014Apr15
Medicago_Hapmap_everything-2014Apr20
Medicago_Hapmap_filtered-set-2014Apr12
Other Species
Step 2
Parameter Configuration for Marker Extraction and Filtering
Include Marker Type:
SNP
INDEL
Exclude Markers from:
Chloroplast
Scaffold
MinAF_Th
(>=)
%
Heter_Ratio_Th
(<=)
%
Unknown_Ratio_Th
(<=)
%
Alle_Len_Dif_Th
(>=)
Reminder to the Users:
1. Welcome to contact us(wezhang AT noble.org) to host your specific Hapmap data.