Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node RPL20
Type: Protein GRN ID: np43344 Name: RPL20
Annotation: RPL20 | ribosomal protein L20
Gene Locus: ATCG00660
Gene Expression (Affy ATH1 probeset): 244970_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 RPL20  --  has similar expression pattern (mutual information value=1.0305) with  --  ACCD
3 RPL20  --  has similar expression pattern (mutual information value=1.36036) with  --  YCF3
4 RPL20  --  has similar expression pattern (mutual information value=0.836161) with  --  ORF77.2
5 RPL20  --  has similar expression pattern (mutual information value=0.836161) with  --  ORF77.1
6 RPL20  --  has similar expression pattern (mutual information value=1.06138) with  --  PETD
7 RPL20  --  has similar expression pattern (mutual information value=1.23606) with  --  RPS15
8 RPL20  --  has similar expression pattern (mutual information value=1.14638) with  --  NDHE
9 RPL20  --  has similar expression pattern (mutual information value=1.0305) with  --  ACCD  --  has similar expression pattern (mutual information value=1.09407) with  --  RPS12; RPS12C
10 RPL20  --  has similar expression pattern (mutual information value=1.0305) with  --  ACCD  --  has similar expression pattern (mutual information value=1.09407) with  --  RPS12; RPS12B
11 RPL20  --  has similar expression pattern (mutual information value=1.0305) with  --  ACCD  --  has similar expression pattern (mutual information value=1.18249) with  --  RPS12; RPS12A
12 RPL20  --  has similar expression pattern (mutual information value=1.0305) with  --  ACCD  --  has similar expression pattern (mutual information value=1.16344) with  --  PSAC
13 RPL20  --  has similar expression pattern (mutual information value=1.36036) with  --  YCF3  --  has similar expression pattern (mutual information value=0.896306) with  --  RPS16
14 RPL20  --  has similar expression pattern (mutual information value=1.36036) with  --  YCF3  --  has similar expression pattern (mutual information value=0.85422) with  --  RPOB
15 RPL20  --  has similar expression pattern (mutual information value=1.36036) with  --  YCF3  --  has similar expression pattern (mutual information value=0.866719) with  --  RPOC1
16 RPL20  --  has similar expression pattern (mutual information value=1.36036) with  --  YCF3  --  has similar expression pattern (mutual information value=1.36376) with  --  ATPI
17 RPL20  --  has similar expression pattern (mutual information value=1.36036) with  --  YCF3  --  has similar expression pattern (mutual information value=1.26787) with  --  RPL14
18 RPL20  --  has similar expression pattern (mutual information value=1.36036) with  --  YCF3  --  has similar expression pattern (mutual information value=1.23464) with  --  PSBB
19 RPL20  --  has similar expression pattern (mutual information value=0.836161) with  --  ORF77.2  --  has similar expression pattern (mutual information value=0.8314) with  --  RPS14
20 RPL20  --  has similar expression pattern (mutual information value=0.836161) with  --  ORF77.2  --  has similar expression pattern (mutual information value=0.822765) with  --  NDHB.1
21 RPL20  --  has similar expression pattern (mutual information value=0.836161) with  --  ORF77.2  --  has similar expression pattern (mutual information value=0.822765) with  --  NDHB.2
22 RPL20  --  has similar expression pattern (mutual information value=1.06138) with  --  PETD  --  has similar expression pattern (mutual information value=0.832671) with  --  YCF6
23 RPL20  --  has similar expression pattern (mutual information value=1.06138) with  --  PETD  --  has similar expression pattern (mutual information value=0.949602) with  --  PSBN
24 RPL20  --  has similar expression pattern (mutual information value=1.14638) with  --  NDHE  --  has similar expression pattern (mutual information value=1.05418) with  --  PSBD
25 RPL20  --  has similar expression pattern (mutual information value=1.14638) with  --  NDHE  --  has similar expression pattern (mutual information value=1.41498) with  --  NDHG
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact