Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATRING1A; RING1A
Type: Protein GRN ID: np43087 Name: ATRING1A; RING1A
Annotation: ATRING1A, RING1A | RING 1A [EC:6.3.2.19]
Gene Locus: AT5G44280
Transcription factor /
transcriptional regulator:		 transcription factor family C2H2
Gene Expression (Affy ATH1 probeset): 249038_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATRING1A; RING1A  --  interacts with  --  AL7
3 ATRING1A; RING1A  --  interacts with  --  AL6
4 ATRING1A; RING1A  --  interacts with  --  AL5
5 ATRING1A; RING1A  --  interacts with  --  AL2
6 ATRING1A; RING1A  --  interacts with  --  AL1
7 ATRING1A; RING1A  --  interacts with  --  AL7  --  is the target gene of  --  ath-miR5019
8 ATRING1A; RING1A  --  interacts with  --  AL6  --  interacts with  --  ASHR3; SDG4
9 ATRING1A; RING1A  --  interacts with  --  AL2  --  interacts with  --  ATCNGC5; CNGC5
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact